Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0453
(520 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0737 + 27258320-27259007,27259263-27259435,27262684-272627... 33 0.14
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 31 0.73
06_01_0672 - 4903126-4903219,4903322-4903430,4903620-4905096,490... 30 0.97
08_02_1416 - 26915306-26915459,26915553-26915668,26915798-269159... 29 1.7
01_01_0757 - 5840736-5842574 29 1.7
07_03_1180 - 24601631-24602142,24602518-24602581,24602811-246028... 29 2.2
03_01_0269 + 2080338-2080508,2081086-2081335,2081432-2082648,208... 29 2.2
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616... 29 3.0
07_03_1764 + 29322683-29323387,29323809-29323889,29323968-293240... 29 3.0
10_05_0061 - 8690637-8691072,8691370-8691464 28 3.9
06_01_0394 - 2835438-2835896,2836664-2836913,2837197-2837669,283... 28 3.9
02_01_0092 - 650534-650553,650638-651013,651125-651349 28 3.9
01_01_0078 + 587975-588179,588506-588606,589087-589167,589240-59... 28 3.9
07_03_1762 - 29299328-29299437,29299782-29299871,29300487-293012... 28 5.2
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 28 5.2
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 28 5.2
04_04_0248 - 23891684-23892064 28 5.2
02_01_0674 + 5020118-5020202,5020301-5020436,5021075-5021140,502... 28 5.2
12_02_0875 - 23920023-23920967,23921045-23921599,23921678-239220... 27 6.8
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 27 6.8
11_04_0451 - 17863381-17864808 27 9.0
10_08_0618 + 19307658-19308584,19308690-19309082 27 9.0
08_02_0140 + 13072140-13072309,13072526-13072793 27 9.0
08_01_0290 - 2335365-2335901 27 9.0
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 27 9.0
05_07_0021 - 27100249-27101838,27102434-27102547 27 9.0
03_06_0352 - 33312443-33312652,33312747-33312854,33313224-333133... 27 9.0
>03_05_0737 +
27258320-27259007,27259263-27259435,27262684-27262758,
27262832-27263296
Length = 466
Score = 33.1 bits (72), Expect = 0.14
Identities = 27/87 (31%), Positives = 33/87 (37%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAFPXXXXXXXXXXXXXXXXXXXSNREGFQNRQYDGYQNR-HANRTG 432
RGGRG G G N G+ ++ GY NR R+G
Sbjct: 379 RGGRGMGGGGYQNGRGGGGGGGYQNGRGGGEGGGYYYNEPGYYQQR--GYSNRGRGGRSG 436
Query: 433 G-DGYYGN-GDVSEGAHHAENGRERYG 507
G + YY N G S+G HA GR G
Sbjct: 437 GGNSYYNNQGGGSQGGGHAHPGRVELG 463
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 30.7 bits (66), Expect = 0.73
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 382 QNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHAENGRERYG 507
Q R Y G N + G GY GNG +G ++ NG R G
Sbjct: 483 QGRGYSG--NGNGGYQQGQGYSGNGGYQQGRGYSNNGGYRRG 522
Score = 28.3 bits (60), Expect = 3.9
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 364 SNREGFQNRQYDGYQNRHANRTGGDGYYGNGDV-SEGAHHAENGRE-RYGE 510
+N G+QN Y+G H N + GNG + G +H + G + +Y E
Sbjct: 89 NNSNGYQNYNYNGNGQGHYNGGYQPIHQGNGQYQNNGNYHGDYGYDGQYAE 139
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGG-DGYYGNGDVSEG 471
N G +N YD Y ++N GG Y NG+ S G
Sbjct: 58 NGSGGRNYDYDYYNRGYSNNNGGYQNYNYNGNNSNG 93
>06_01_0672 -
4903126-4903219,4903322-4903430,4903620-4905096,
4906200-4906538
Length = 672
Score = 30.3 bits (65), Expect = 0.97
Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 1/129 (0%)
Frame = +2
Query: 128 EDTSPVSPVTDKEDDCRKDGPSPELENGGDRKGDSQSRYRRFVAAAEAHRTVIAAEALSL 307
E T+ P TD+ED D P ++ S S AA A + + S
Sbjct: 425 EATAKERPATDRED----DSPQSSDQSFYSNVDSSFSHRSELELAASATDSPLHGSPSST 480
Query: 308 IVKAVTAIGADKVVITKTDRTGKDFKTDNMTATKIGMRTVP-VATDIMATVTCQKVHITP 484
+ AD ++ K ++ + D A +I +P T ++V C +P
Sbjct: 481 GPSTEQLLEADAAMLRKKREEEEEEEEDEAAAGEINSLLIPSTTTSSSSSVACPVTVQSP 540
Query: 485 RTVVSGMER 511
V+G +R
Sbjct: 541 MEAVAGFKR 549
>08_02_1416 -
26915306-26915459,26915553-26915668,26915798-26915910,
26915995-26916130,26916219-26916338,26916472-26916648,
26916790-26916862,26916948-26917083,26917179-26918055,
26918138-26918331,26918438-26918620,26918730-26918796,
26918900-26919092,26919317-26919363,26919478-26919574,
26919663-26919790,26919905-26920009,26920763-26920879
Length = 1010
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 107 SVTPVLQEDTSPVSPVTDKEDDCRKDGPSPE 199
+V P+L E S SP E+ C DGP PE
Sbjct: 858 TVKPLLVELGSGTSPNKKNEEKCAADGPYPE 888
>01_01_0757 - 5840736-5842574
Length = 612
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = -2
Query: 360 VLVITTLSAPIAVTALTIRESASAAMTVRCASAAATKRLYRLWESPLRSPPFSNSGLGPS 181
+L++ P A+ + + A + V A+AA T Y + PLR PP +SG +
Sbjct: 6 LLLLLVFYIPAAIASRRNLRLSPADIAVPDAAAADTPTTYFEVDRPLRPPP-GSSGPCST 64
Query: 180 FLQSSSLSVT 151
L SSS T
Sbjct: 65 LLLSSSFGFT 74
>07_03_1180 -
24601631-24602142,24602518-24602581,24602811-24602876,
24602949-24603070,24603170-24603344,24603466-24603701,
24603781-24604129,24605009-24605146,24605242-24605289
Length = 569
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +1
Query: 382 QNRQYDGY-QNRHANRTGGDGYYGNGD--VSEGAHHAENGRERY 504
QN GY QN + GDGY+ NG+ G + +NG E Y
Sbjct: 475 QNGNGGGYHQNGNGYHQNGDGYHQNGNRYNQNGNRYHQNGDEYY 518
>03_01_0269 +
2080338-2080508,2081086-2081335,2081432-2082648,
2082933-2083083,2083247-2083563
Length = 701
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 200 LENGGDRKGDSQSRYRRFVAAAEAHRTVIAAEALSLIVKAVTAI-GADKVVITKTDRTGK 376
LEN RK D+ +RY + + EA + ++ I+ A A+ +V D+TGK
Sbjct: 438 LENAKQRKLDTAARYAKKLLKLEAGSELKTWLLMARIMSAQRRFEDAESIVNAALDQTGK 497
Query: 377 DFKTD 391
F+ D
Sbjct: 498 WFQGD 502
>10_08_0343 -
16960764-16960895,16961166-16961171,16961272-16961640,
16962118-16962304,16962567-16962759,16962864-16963137,
16963215-16963374,16963985-16964199,16964784-16964876,
16965192-16965260,16965293-16965445,16965534-16965737,
16966416-16966691,16967336-16967431,16967585-16967788,
16967877-16968069,16968229-16968374,16968771-16969425,
16971462-16971774,16971989-16972139,16972602-16973815,
16973933-16974182,16974784-16975035
Length = 1934
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 253 RRGGRGAPNGHRGRG 297
RRGG G PN RGRG
Sbjct: 855 RRGGGGGPNSQRGRG 869
>07_03_1764 +
29322683-29323387,29323809-29323889,29323968-29324072,
29324453-29325382,29326728-29326856,29326953-29327042,
29327237-29327293,29327362-29327394
Length = 709
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 397 DGYQNRHANRTGGDGYYGNGDVS--EGAHHAENGR 495
DG ++ +RTGG +YG G+ S HAE GR
Sbjct: 62 DGDRSHPRDRTGGGDHYGAGEGSGPRMDRHAEGGR 96
>10_05_0061 - 8690637-8691072,8691370-8691464
Length = 176
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 421 NRTGGDGYYGNGDVSEGAHHAENGRER 501
NRT +GY G+ V A H E+GRER
Sbjct: 120 NRTTREGYTGSALVLLVAAHRESGRER 146
>06_01_0394 -
2835438-2835896,2836664-2836913,2837197-2837669,
2838941-2840608
Length = 949
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = -2
Query: 441 SVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALTIRESASAAMTVRCASA 262
S++ ++ + +LVAV+L+ + + S++ L AVTA ++R +A A V C
Sbjct: 669 SLSKASMAVWLLVAVVLATNYTASLSSLMTAQRLGREAAVTAESLRSAAGA--VVGCTEG 726
Query: 261 AATKR 247
+ R
Sbjct: 727 SVVGR 731
>02_01_0092 - 650534-650553,650638-651013,651125-651349
Length = 206
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 143 VSPVTDKEDDCRKDGPSPELENGGDRKGDSQSRYRRFVAAAEAHRTVIAAEALSLIVKA 319
V P+ D+E + D SPE + DR+ SR R + A A + + +++V A
Sbjct: 13 VLPIIDEESESEMDEGSPERKVVDDRRKAIVSRMRELLRRAAAQSSAQSKLRSTVLVSA 71
>01_01_0078 +
587975-588179,588506-588606,589087-589167,589240-590178,
590388-590542,590837-590902,590963-591023,591659-591853,
591939-592049,592116-592280
Length = 692
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 223 GRLPESIQTFRRGGRGAPNGHRGRGAF 303
G P Q +R GGRG G R RG++
Sbjct: 641 GDFPRHRQPYRGGGRGYRGGGRARGSY 667
>07_03_1762 -
29299328-29299437,29299782-29299871,29300487-29301291,
29301956-29303278
Length = 775
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 98 VHVSVTPVLQEDTSPVSPVTDKEDDCRKDGPSPELENGGDRKG 226
V S P ++ DTS VT E+ K+ P+ E +KG
Sbjct: 260 VEASAWPAVESDTSEFEFVTSDEEAADKEAPAAEPAKTKGKKG 302
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 403 YQNRHANRTGGDGYYGNGDVSEGAHHAENGRERYG 507
Y+N+ A T G+ GNGD ++ G++ G
Sbjct: 766 YENKFATSTNGNYSIGNGDTLSSSNSLHAGKQNAG 800
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 39 PPLHLSPYITQCNPLSSRLWYTSLLRP 119
PP H NPLSS+LW +S L P
Sbjct: 53 PPPHRPSPSPPPNPLSSKLWLSSKLSP 79
>04_04_0248 - 23891684-23892064
Length = 126
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = -2
Query: 369 VRSVLVITTLSAPIAVTALTIRESASAAMTVRCASAAATKRL------YRLWESPLRSPP 208
++SV T A A +R +A+AA +R A+AAA L R+W ++ P
Sbjct: 35 MQSVAAAATRFRSAAAAASRMRLAAAAATRMRPAAAAAMPLLPSAATAARMWPPAAKAAP 94
Query: 207 FSNSGLGPSFLQSSSLSV 154
+ + LQS++ SV
Sbjct: 95 MHPAAATAAPLQSATASV 112
>02_01_0674 +
5020118-5020202,5020301-5020436,5021075-5021140,
5021219-5021290,5021362-5021433,5024242-5024301,
5024494-5024565,5024655-5024720,5024798-5024863,
5024945-5025273,5025713-5025969,5026213-5026484,
5026580-5026715,5026833-5026972,5027051-5027207,
5027476-5027634
Length = 714
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -2
Query: 351 ITTLSAPIAVTALTIRESASAAMTVRCASAAATKRLYRLWESPLRSPPFSNSGLG 187
+ L+A + L + SA A T + AAA LY W SP + +S G G
Sbjct: 1 MAALAAALVGFLLAV-SSAPAGATTDASDAAALGNLYSSWNSPSQLAGWSAGGGG 54
>12_02_0875 -
23920023-23920967,23921045-23921599,23921678-23922083,
23922175-23922452
Length = 727
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -2
Query: 342 LSAPIAVTALTIRESASAAMTV-RCASA-AATKRLYRLWESPLRSPPFSNSGLG 187
+++P T SASAA +V R AS AA + +W P+R + + G G
Sbjct: 11 VASPAYEATTTSSSSASAAYSVSRSASTGAAAAEVASIWSRPVRLDAYEDDGDG 64
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +2
Query: 107 SVTPVLQEDTSPVSPV---TDKEDDCRKDGPSPELENGGDRKGDSQS 238
+V V + +SP+SP TDK+D+C +D N G D S
Sbjct: 633 TVLSVEGKKSSPISPKGQDTDKKDECDEDPSVDPKHNNGKESDDPVS 679
>11_04_0451 - 17863381-17864808
Length = 475
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/95 (24%), Positives = 38/95 (40%)
Frame = -2
Query: 444 ISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALTIRESASAAMTVRCAS 265
+ + + R L A++ SV P + + ++ ++A + + A + A
Sbjct: 140 LRLGSAASRAAALDALVDSVGSLPPSAAAVAVSAVAAMLDSGEILPASREKAVSVLAAAQ 199
Query: 264 AAATKRLYRLWESPLRSPPFSNSGLGPSFLQSSSL 160
AAA L L P P F G PS +Q SL
Sbjct: 200 AAAAGVLRNLAAFPDLLPTFREEGALPSLIQLVSL 234
>10_08_0618 + 19307658-19308584,19308690-19309082
Length = 439
Score = 27.1 bits (57), Expect = 9.0
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = -2
Query: 426 TVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALTIRESASAAMTVRCASAAATKR 247
T +MP L AVIL L+ P ++ + I V I + A+ V A R
Sbjct: 330 TQKMPYLKAVILEGLRKHPPGHFVLAHKAAEDIEVGGYLIPKGATVNFMV-----AEMGR 384
Query: 246 LYRLWESPLRSPP 208
R WE+P++ P
Sbjct: 385 DEREWENPMQFMP 397
>08_02_0140 + 13072140-13072309,13072526-13072793
Length = 145
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 219 RSPPFSNSGLGPSFLQSSSLSVTGETGEVS 130
R P S+SGL PS S+S G+ GE++
Sbjct: 52 RDVPHSSSGLPPSSRMCRSVSFGGDLGELT 81
>08_01_0290 - 2335365-2335901
Length = 178
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 170 DCRKDGPSPELENGGDRKGDSQSRYRR 250
D R+ GP L GG R+G S R RR
Sbjct: 129 DGRRGGPPERLRAGGARQGRSGGRRRR 155
>07_03_1530 +
27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 394 YDGYQNRHANRTGGDGYYGNGDVSEGAHHAENGRERYGEAT 516
YD +N + N++ G DV + AH++ + R GE +
Sbjct: 134 YDSLKNENNNKSDTSGTDVKPDVEDAAHNSNSDRGGRGEGS 174
>05_07_0021 - 27100249-27101838,27102434-27102547
Length = 567
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 342 LSAPIAVTALTIRESASAAMTVRCASAAATKRLYRLWES 226
+ A IA IRES R + AAAT RL + ES
Sbjct: 381 IDAEIAAAEKRIRESVRELGAARASEAAATARLKAIVES 419
>03_06_0352 -
33312443-33312652,33312747-33312854,33313224-33313397,
33313489-33313695,33313700-33313987,33314087-33314319,
33314450-33315263
Length = 677
Score = 27.1 bits (57), Expect = 9.0
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 336 APIAVTALTIRESASAAMTVRCASAAATKR--LYRLWESPLRSPPFSNSGLGPSFLQSSS 163
+P+AV+++ R S+++ ASA A R ++ L S P S+ PS S
Sbjct: 82 SPLAVSSIRFRRRNSSSIDASAASAFAAARPLMHHLLSSFSSPSPSSSPSPSPSTSDSCP 141
Query: 162 LSVTGETGEVSS 127
+++ T ++S
Sbjct: 142 STISVPTHRLTS 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,428,048
Number of Sequences: 37544
Number of extensions: 289949
Number of successful extensions: 1495
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1489
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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