Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0453
(520 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 30 5.6
BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein pr... 30 5.6
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 30 5.6
BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. 30 5.6
BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein. 30 5.6
AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor, argini... 30 5.6
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 30 5.6
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 30 5.6
AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, argini... 30 5.6
L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein. 29 7.4
BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear r... 29 7.4
BC004511-1|AAH04511.2| 207|Homo sapiens HNRPH3 protein protein. 29 7.4
AL117395-1|CAB55897.1| 215|Homo sapiens hypothetical protein pr... 29 7.4
AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear r... 29 7.4
AF132364-1|AAF68852.1| 139|Homo sapiens hnRNP 2H9E protein. 29 7.4
AF132363-1|AAF68851.1| 145|Homo sapiens hnRNP 2H9D protein. 29 7.4
AF132362-1|AAF68850.1| 297|Homo sapiens hnRNP 2H9B protein. 29 7.4
AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein. 29 7.4
AF132360-6|AAF68846.1| 139|Homo sapiens hnRNP 2H9E protein. 29 7.4
AF132360-5|AAF68845.1| 145|Homo sapiens hnRNP 2H9D protein. 29 7.4
AF132360-4|AAF68848.1| 215|Homo sapiens hnRNP 2H9C protein. 29 7.4
AF132360-3|AAF68844.1| 297|Homo sapiens hnRNP 2H9B protein. 29 7.4
AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein. 29 7.4
AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein. 29 7.4
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 29 9.8
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 29 9.8
BX538163-1|CAD98043.1| 243|Homo sapiens hypothetical protein pr... 29 9.8
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 29 9.8
BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence si... 29 9.8
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 29 9.8
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 29 9.8
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 29 9.8
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 29 9.8
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 1 RQSTAPAAACHARRPSTSARTSHNATRSRRDS 96
R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 256 RRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BX641004-1|CAE46007.1| 332|Homo sapiens hypothetical protein
protein.
Length = 332
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 1 RQSTAPAAACHARRPSTSARTSHNATRSRRDS 96
R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 104 RRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 135
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 1 RQSTAPAAACHARRPSTSARTSHNATRSRRDS 96
R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 256 RRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein.
Length = 394
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 1 RQSTAPAAACHARRPSTSARTSHNATRSRRDS 96
R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 256 RRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein.
Length = 321
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 1 RQSTAPAAACHARRPSTSARTSHNATRSRRDS 96
R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 256 RRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-7|CAI22336.1| 424|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 424
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 1 RQSTAPAAACHARRPSTSARTSHNATRSRRDS 96
R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 196 RRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 227
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 1 RQSTAPAAACHARRPSTSARTSHNATRSRRDS 96
R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 256 RRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 1 RQSTAPAAACHARRPSTSARTSHNATRSRRDS 96
R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 256 RRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 389
Score = 29.9 bits (64), Expect = 5.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 1 RQSTAPAAACHARRPSTSARTSHNATRSRRDS 96
R+ P+++ H R S S R SH+ +RSRR S
Sbjct: 256 RRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRS 287
>L32610-1|AAD45179.1| 346|Homo sapiens ribonucleoprotein protein.
Length = 346
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 157 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 192
>BC039824-1|AAH39824.1| 331|Homo sapiens heterogeneous nuclear
ribonucleoprotein H3 (2H9) protein.
Length = 331
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 142 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 177
>BC004511-1|AAH04511.2| 207|Homo sapiens HNRPH3 protein protein.
Length = 207
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 18 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 53
>AL117395-1|CAB55897.1| 215|Homo sapiens hypothetical protein
protein.
Length = 215
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 26 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 61
>AK223441-1|BAD97161.1| 346|Homo sapiens heterogeneous nuclear
ribonucleoprotein H3 isoform a variant protein.
Length = 346
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 157 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 192
>AF132364-1|AAF68852.1| 139|Homo sapiens hnRNP 2H9E protein.
Length = 139
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 20 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 55
>AF132363-1|AAF68851.1| 145|Homo sapiens hnRNP 2H9D protein.
Length = 145
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 26 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 61
>AF132362-1|AAF68850.1| 297|Homo sapiens hnRNP 2H9B protein.
Length = 297
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 108 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 143
>AF132361-1|AAF68849.1| 331|Homo sapiens hnRNP 2H9A protein.
Length = 331
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 142 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 177
>AF132360-6|AAF68846.1| 139|Homo sapiens hnRNP 2H9E protein.
Length = 139
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 20 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 55
>AF132360-5|AAF68845.1| 145|Homo sapiens hnRNP 2H9D protein.
Length = 145
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 26 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 61
>AF132360-4|AAF68848.1| 215|Homo sapiens hnRNP 2H9C protein.
Length = 215
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 26 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 61
>AF132360-3|AAF68844.1| 297|Homo sapiens hnRNP 2H9B protein.
Length = 297
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 108 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 143
>AF132360-2|AAF68847.1| 331|Homo sapiens hnRNP 2H9A protein.
Length = 331
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 142 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 177
>AF132360-1|AAF68843.1| 346|Homo sapiens hnRNP 2H9 protein.
Length = 346
Score = 29.5 bits (63), Expect = 7.4
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 367 NREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAH 477
N G+ N +D + R GG GY G GD S G H
Sbjct: 157 NNYGYGNDGFDD-RMRDGRGMGGHGYGGAGDASSGFH 192
>DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear
ribonucleoprotein-R2 protein.
Length = 595
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAFP 306
RGGRGAP RGRGA P
Sbjct: 468 RGGRGAPPPPRGRGAPP 484
>BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein
protein.
Length = 613
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAFP 306
RGGRGAP RGRGA P
Sbjct: 486 RGGRGAPPPPRGRGAPP 502
>BX538163-1|CAD98043.1| 243|Homo sapiens hypothetical protein
protein.
Length = 243
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAFP 306
RGGRGAP RGRGA P
Sbjct: 116 RGGRGAPPPPRGRGAPP 132
>BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein.
Length = 607
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAFP 306
RGGRGAP RGRGA P
Sbjct: 480 RGGRGAPPPPRGRGAPP 496
>BC060860-1|AAH60860.2| 518|Homo sapiens family with sequence
similarity 98, member A protein.
Length = 518
Score = 29.1 bits (62), Expect = 9.8
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 376 GFQNRQYDGYQNRHANRTG----GDGYYGNGDVSEGAHHAENGRERYG 507
G+Q Y G+Q ++ TG G GY + +G HH + G R G
Sbjct: 417 GYQGGGYGGFQTS-SSYTGSGYQGGGYQQDNGYQDGGHHGDRGGGRGG 463
>BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein.
Length = 636
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAFP 306
RGGRGAP RGRGA P
Sbjct: 509 RGGRGAPPPPRGRGAPP 525
>AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 636
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAFP 306
RGGRGAP RGRGA P
Sbjct: 509 RGGRGAPPPPRGRGAPP 525
>AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAFP 306
RGGRGAP RGRGA P
Sbjct: 506 RGGRGAPPPPRGRGAPP 522
>AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear
ribonucleoprotein R protein.
Length = 633
Score = 29.1 bits (62), Expect = 9.8
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAFP 306
RGGRGAP RGRGA P
Sbjct: 506 RGGRGAPPPPRGRGAPP 522
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,195,521
Number of Sequences: 237096
Number of extensions: 1433968
Number of successful extensions: 5462
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 5118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5460
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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