Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0453
(520 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical ... 29 1.5
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80447-10|AAB37814.1| 477|Caenorhabditis elegans Hypothetical p... 28 3.5
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 3.5
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 28 3.5
Z69383-1|CAA93412.1| 409|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 27 6.1
Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical p... 27 8.0
AF099920-2|AAL32226.2| 437|Caenorhabditis elegans Hypothetical ... 27 8.0
AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical... 27 8.0
>AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical
protein F55A12.6 protein.
Length = 423
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Frame = +1
Query: 379 FQNRQYDGYQNRHANRTGG----DGYYGNGDVSEG 471
F NRQ GY N + N G +GYYGNG G
Sbjct: 113 FGNRQQIGYNNVYGNGYYGNGYNNGYYGNGYYGNG 147
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 28.3 bits (60), Expect = 3.5
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -1
Query: 406 GSRHI--VCFEILPCSICFGNHHLVG 335
G RH +C+ L C+ C G HH G
Sbjct: 655 GERHSSSMCYSTLKCTYCSGRHHPAG 680
>U80447-10|AAB37814.1| 477|Caenorhabditis elegans Hypothetical
protein F55F8.9 protein.
Length = 477
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 379 FQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHAENGRE 498
F+NR+Y +R+ NR G NGD+ G + E G E
Sbjct: 224 FKNRRYGRRISRNQNRFSSYGSTLNGDLLFGENDDEEGSE 263
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/86 (23%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAFPXXXXXXXXXXXXXXXXXXXSNREGFQNRQ--YDGYQNRHANRT 429
RG G+P G RG G +R G + + G + R
Sbjct: 226 RGRSGSPGGRRGHGGRHGSRSGSPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRH 285
Query: 430 GGDGYYGNGDVSEGAHHAENGRERYG 507
GG G +G+ S H G +G
Sbjct: 286 GGHGRHGSCSGSPRGRHGHGGHGGHG 311
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.3 bits (60), Expect = 3.5
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = +1
Query: 175 QKRWTESRVRERWRP*GRLPESIQTFRRGGRGAPNGHRGRG 297
+K WTE R+ R G RGGRG G GRG
Sbjct: 314 EKYWTEFNARKNQRQGGGRGGRGGRGGRGGRGGRGGRGGRG 354
>Z69383-1|CAA93412.1| 409|Caenorhabditis elegans Hypothetical
protein F13E9.4 protein.
Length = 409
Score = 27.9 bits (59), Expect = 4.6
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 370 REGFQNRQYDGYQ-NRHANRTGGDGYYGNGDVSEGAHHAENGRERYG 507
++GFQ+ + G Q + N GG G YG G +G+ +G
Sbjct: 125 QQGFQSNGFSGQQASGSMNSFGGQGGYGQNQNGFGGQSGFSGQSGWG 171
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 364 SNREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHAEN 489
+N F ++ + N++ NR GD Y GNG+ + + N
Sbjct: 166 NNNNNFNSK--NNRMNKYGNRNDGDDYNGNGNNQDNWNSGSN 205
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 364 SNREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHAENGRE 498
+ +G+ + + N + N GG G Y N G+++ NG +
Sbjct: 428 NRNDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNNGND 472
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 364 SNREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHAEN 489
+N F ++ + N++ NR GD Y GNG+ + + N
Sbjct: 166 NNNNNFNSK--NNRMNKYGNRNDGDDYNGNGNNQDNWNSGSN 205
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 364 SNREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHAENGRE 498
+ +G+ + + N + N GG G Y N G+++ NG +
Sbjct: 428 NRNDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNNGND 472
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 487 SRRDVHLLTRHRCHNIRRHRYGSHAYFGS 401
+ D+HL++R N++R +Y FGS
Sbjct: 502 TNEDLHLISRKLISNLKRKQYSGSGNFGS 530
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 27.5 bits (58), Expect = 6.1
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 487 SRRDVHLLTRHRCHNIRRHRYGSHAYFGS 401
+ D+HL++R N++R +Y FGS
Sbjct: 502 TNEDLHLISRKLISNLKRKQYSGSGNFGS 530
>Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical
protein T10B10.2 protein.
Length = 422
Score = 27.5 bits (58), Expect = 6.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +2
Query: 188 PSPELENGGDRKGDSQSRYRRFVAAAEAHRTVIAAEALSLIVKAVTAIGADKVVITKTDR 367
PS GG+ + D+ S+Y + A E +AL+ +TA+G V T
Sbjct: 231 PSSSAYKGGEVRRDADSKYAHVIVAGEG-AAGNNTKALATQAVLLTALGNSSPVKFNTGT 289
Query: 368 TG 373
TG
Sbjct: 290 TG 291
>Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical
protein F54B11.11 protein.
Length = 598
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 444 ISVATGTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALT 310
I+ A+GT PIL + S K+ + S ITT A I T T
Sbjct: 464 ITAASGTTTQPILSTMTSSTTKT--LTSTTTITTTKANILTTTAT 506
>AF099920-2|AAL32226.2| 437|Caenorhabditis elegans Hypothetical
protein H06H21.6 protein.
Length = 437
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -2
Query: 423 VRMP--ILVAVILSVLKSFPVRSVLVITTLSAPIAVTALTIRESASAAMTVRCASAA 259
VR+P +L+ + + F V V +TLS ++ + T+R++AS + AS A
Sbjct: 341 VRLPGNLLMQGVFGCHEPFSAVRVFVASTLSDALSTSEFTLRDAASQLVEDESASLA 397
>AF022973-10|AAC25795.2| 1143|Caenorhabditis elegans Hypothetical
protein F25G6.2 protein.
Length = 1143
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 158 DKEDDCRKDGPSPELENGGDRKGDSQSRYRRFVAAAEAHRTVIAAEALSL 307
D +DD + GPS N D + ++ +F+ H TV+ +SL
Sbjct: 374 DDDDDDDEAGPSTSTVNAKDARTEAIDMTAKFIMECLNHETVMNLVKISL 423
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,635,461
Number of Sequences: 27780
Number of extensions: 213535
Number of successful extensions: 940
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 934
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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