Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0452
         (712 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine rece...    31   1.5  
D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine rece...    31   1.5  
D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine rece...    31   1.5  
D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine rece...    31   1.5  
AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD...    31   1.5  
AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC...    31   1.5  
AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB...    31   1.5  
AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA...    31   1.5  

>D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5112

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 276  FLIARCERELDGKNSYEKLSRHFLDPS 356
            FL+A CER  +GK  Y     HF +PS
Sbjct: 4225 FLLACCERNHEGKIDYRAFVEHFHEPS 4251


>D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5112

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 276  FLIARCERELDGKNSYEKLSRHFLDPS 356
            FL+A CER  +GK  Y     HF +PS
Sbjct: 4225 FLLACCERNHEGKIDYRAFVEHFHEPS 4251


>D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5126

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 276  FLIARCERELDGKNSYEKLSRHFLDPS 356
            FL+A CER  +GK  Y     HF +PS
Sbjct: 4239 FLLACCERNHEGKIDYRAFVEHFHEPS 4265


>D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine receptor
            homologue protein.
          Length = 5126

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 276  FLIARCERELDGKNSYEKLSRHFLDPS 356
            FL+A CER  +GK  Y     HF +PS
Sbjct: 4239 FLLACCERNHEGKIDYRAFVEHFHEPS 4265


>AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD,
            isoform D protein.
          Length = 5113

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 276  FLIARCERELDGKNSYEKLSRHFLDPS 356
            FL+A CER  +GK  Y     HF +PS
Sbjct: 4226 FLLACCERNHEGKIDYRAFVEHFHEPS 4252


>AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC,
            isoform C protein.
          Length = 5127

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 276  FLIARCERELDGKNSYEKLSRHFLDPS 356
            FL+A CER  +GK  Y     HF +PS
Sbjct: 4240 FLLACCERNHEGKIDYRAFVEHFHEPS 4266


>AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB,
            isoform B protein.
          Length = 5113

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 276  FLIARCERELDGKNSYEKLSRHFLDPS 356
            FL+A CER  +GK  Y     HF +PS
Sbjct: 4226 FLLACCERNHEGKIDYRAFVEHFHEPS 4252


>AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA,
            isoform A protein.
          Length = 5127

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 276  FLIARCERELDGKNSYEKLSRHFLDPS 356
            FL+A CER  +GK  Y     HF +PS
Sbjct: 4240 FLLACCERNHEGKIDYRAFVEHFHEPS 4266


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,200,554
Number of Sequences: 53049
Number of extensions: 530310
Number of successful extensions: 923
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)