Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0448
         (718 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0232 + 6614784-6614882,6616145-6616477,6616708-6616967,661...    29   2.8  
02_05_1218 - 35007536-35007658,35007868-35008101                       28   8.5  

>03_02_0232 + 6614784-6614882,6616145-6616477,6616708-6616967,
            6617328-6617469,6617567-6617938,6618056-6618187,
            6618907-6619035,6619125-6621188
          Length = 1176

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
 Frame = -2

Query: 261  PLTQTAPTFSIF--SPPYRRDLHQ 196
            P+ +T P+F +   SPPYR  LHQ
Sbjct: 1046 PIRKTTPSFRVMHTSPPYRNGLHQ 1069


>02_05_1218 - 35007536-35007658,35007868-35008101
          Length = 118

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 235 ERWRRLCERRMPSMFRAGVAAHSPHTSIHTT*LPMG 342
           +RWR + E  + S   A VAA  P +S+H+    +G
Sbjct: 14  QRWRVIVETSIASSAAAAVAAGLPASSVHSNKARLG 49


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,386,276
Number of Sequences: 37544
Number of extensions: 365911
Number of successful extensions: 811
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 811
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)