Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0448
         (718 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09723-1|CAA70889.1|  803|Homo sapiens Miz-1 protein protein.          31   3.1  
BC126163-1|AAI26164.1|  803|Homo sapiens zinc finger and BTB dom...    31   3.1  
AL034555-3|CAB85445.1|  803|Homo sapiens zinc finger and BTB dom...    31   3.1  
AL034555-2|CAI19525.1|  240|Homo sapiens zinc finger and BTB dom...    31   3.1  
AK223618-1|BAD97338.1|  803|Homo sapiens zinc finger and BTB dom...    31   3.1  

>Y09723-1|CAA70889.1|  803|Homo sapiens Miz-1 protein protein.
          Length = 803

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 144 EKTLADKGTMQRHLRCALGEGPCDMV 221
           ++  AD G +QRH+R   GE PC  V
Sbjct: 508 QRQFADPGALQRHVRIHTGEKPCQCV 533


>BC126163-1|AAI26164.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 803

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 144 EKTLADKGTMQRHLRCALGEGPCDMV 221
           ++  AD G +QRH+R   GE PC  V
Sbjct: 508 QRQFADPGALQRHVRIHTGEKPCQCV 533


>AL034555-3|CAB85445.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 803

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 144 EKTLADKGTMQRHLRCALGEGPCDMV 221
           ++  AD G +QRH+R   GE PC  V
Sbjct: 508 QRQFADPGALQRHVRIHTGEKPCQCV 533


>AL034555-2|CAI19525.1|  240|Homo sapiens zinc finger and BTB domain
           containing 17 protein.
          Length = 240

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 144 EKTLADKGTMQRHLRCALGEGPCDMV 221
           ++  AD G +QRH+R   GE PC  V
Sbjct: 64  QRQFADPGALQRHVRIHTGEKPCQCV 89


>AK223618-1|BAD97338.1|  803|Homo sapiens zinc finger and BTB domain
           containing 17 variant protein.
          Length = 803

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +3

Query: 144 EKTLADKGTMQRHLRCALGEGPCDMV 221
           ++  AD G +QRH+R   GE PC  V
Sbjct: 508 QRQFADPGALQRHVRIHTGEKPCQCV 533


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,048,780
Number of Sequences: 237096
Number of extensions: 2052850
Number of successful extensions: 3460
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3457
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)