Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0447
(253 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory recept... 23 0.66
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 2.0
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 20 3.5
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 19 6.2
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 19 8.1
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 19 8.1
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 19 8.1
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 19 8.1
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 19 8.1
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 19 8.1
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 19 8.1
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 19 8.1
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 19 8.1
>AM292357-1|CAL23169.2| 355|Tribolium castaneum gustatory receptor
candidate 36 protein.
Length = 355
Score = 22.6 bits (46), Expect = 0.66
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -1
Query: 169 DRMKVGPSGVHSLSCRSST*LRIFCYLMNDYSMVSSA*SNFIS 41
DR+KV + V L T L + CY+ +S + SN I+
Sbjct: 123 DRVKVYQAPVLQLFLYIFTYLSVTCYVTYAWSPIDHTESNIIN 165
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.0 bits (42), Expect = 2.0
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = -1
Query: 190 CN*SNIVDRMKVGPSGVH 137
C+ N + ++GP+GVH
Sbjct: 291 CDCPNCQEAERLGPAGVH 308
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 20.2 bits (40), Expect = 3.5
Identities = 5/15 (33%), Positives = 10/15 (66%)
Frame = +3
Query: 102 ILSQVLDRHDRLCTP 146
+++ +DRH +C P
Sbjct: 131 LMATAIDRHQAICYP 145
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 19.4 bits (38), Expect = 6.2
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 178 NIVDRMKVGPSG 143
+IVD VGPSG
Sbjct: 660 SIVDDSDVGPSG 671
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 19.0 bits (37), Expect = 8.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 149 LGGA*SVVPVQHLTKDF 99
+GG+ + +Q L KDF
Sbjct: 164 VGGSTRIPKIQQLIKDF 180
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.0 bits (37), Expect = 8.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 130 TDYAPPRARPSFCLRCY 180
TDY P A ++ CY
Sbjct: 27 TDYYNPNANSTYPPACY 43
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.0 bits (37), Expect = 8.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 130 TDYAPPRARPSFCLRCY 180
TDY P A ++ CY
Sbjct: 27 TDYYNPNANSTYPPACY 43
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 19.0 bits (37), Expect = 8.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 130 TDYAPPRARPSFCLRCY 180
TDY P A ++ CY
Sbjct: 27 TDYYNPNANSTYPPACY 43
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 19.0 bits (37), Expect = 8.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 130 TDYAPPRARPSFCLRCY 180
TDY P A ++ CY
Sbjct: 27 TDYYNPNANSTYPPACY 43
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 19.0 bits (37), Expect = 8.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 130 TDYAPPRARPSFCLRCY 180
TDY P A ++ CY
Sbjct: 27 TDYYNPNANSTYPPACY 43
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 19.0 bits (37), Expect = 8.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 130 TDYAPPRARPSFCLRCY 180
TDY P A ++ CY
Sbjct: 27 TDYYNPNANSTYPPACY 43
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 19.0 bits (37), Expect = 8.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 130 TDYAPPRARPSFCLRCY 180
TDY P A ++ CY
Sbjct: 27 TDYYNPNANSTYPPACY 43
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 19.0 bits (37), Expect = 8.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = +1
Query: 130 TDYAPPRARPSFCLRCY 180
TDY P A ++ CY
Sbjct: 27 TDYYNPNANSTYPPACY 43
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,745
Number of Sequences: 336
Number of extensions: 976
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used: 3844548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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