Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0447
         (253 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF336237-1|AAK16733.1|  945|Homo sapiens anion exchanger AE4 pro...    31   0.67 
AF332961-1|AAK69625.1|  959|Homo sapiens anion exchanger AE4 pro...    31   0.67 
AF313465-1|AAK28832.1|  990|Homo sapiens sodium bicarbonate cotr...    31   0.67 
AB032762-1|BAA93010.1|  957|Homo sapiens sodium bicarbonate cotr...    31   0.67 
BC098448-1|AAH98448.1|  410|Homo sapiens membrane-associated rin...    30   1.2  
BC048793-1|AAH48793.1|  357|Homo sapiens MARCH4 protein protein.       30   1.2  
AB037820-1|BAA92637.1|  452|Homo sapiens KIAA1399 protein protein.     30   1.2  
AB065941-1|BAC45263.1|  232|Homo sapiens seven transmembrane hel...    29   3.6  
AB065607-1|BAC05834.1|  326|Homo sapiens seven transmembrane hel...    29   3.6  

>AF336237-1|AAK16733.1|  945|Homo sapiens anion exchanger AE4
           protein.
          Length = 945

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 128 RQTMHPRGPDLHSVYDVTLITILSYL 205
           RQ  HPRGP  H+V D+   ++L +L
Sbjct: 573 RQGGHPRGPGCHTVPDIAFFSLLLFL 598


>AF332961-1|AAK69625.1|  959|Homo sapiens anion exchanger AE4
           protein.
          Length = 959

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 128 RQTMHPRGPDLHSVYDVTLITILSYL 205
           RQ  HPRGP  H+V D+   ++L +L
Sbjct: 587 RQGGHPRGPGCHTVPDIAFFSLLLFL 612


>AF313465-1|AAK28832.1|  990|Homo sapiens sodium bicarbonate
           cotransporter protein.
          Length = 990

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 128 RQTMHPRGPDLHSVYDVTLITILSYL 205
           RQ  HPRGP  H+V D+   ++L +L
Sbjct: 618 RQGGHPRGPGCHTVPDIAFFSLLLFL 643


>AB032762-1|BAA93010.1|  957|Homo sapiens sodium bicarbonate
           cotransporter 5 protein.
          Length = 957

 Score = 31.1 bits (67), Expect = 0.67
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 128 RQTMHPRGPDLHSVYDVTLITILSYL 205
           RQ  HPRGP  H+V D+   ++L +L
Sbjct: 585 RQGGHPRGPGCHTVPDIAFFSLLLFL 610


>BC098448-1|AAH98448.1|  410|Homo sapiens membrane-associated ring
           finger (C3HC4) 4 protein.
          Length = 410

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 89  EITKNP*SSAGPARQTMHPRGPDLHSVYDVTLITILSYLQLNKWR 223
           E    P    GPA+   HP GP  H     T++ ILS+L+ ++ R
Sbjct: 350 ETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRPHEQR 394


>BC048793-1|AAH48793.1|  357|Homo sapiens MARCH4 protein protein.
          Length = 357

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 89  EITKNP*SSAGPARQTMHPRGPDLHSVYDVTLITILSYLQLNKWR 223
           E    P    GPA+   HP GP  H     T++ ILS+L+ ++ R
Sbjct: 297 ETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRPHEQR 341


>AB037820-1|BAA92637.1|  452|Homo sapiens KIAA1399 protein protein.
          Length = 452

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 89  EITKNP*SSAGPARQTMHPRGPDLHSVYDVTLITILSYLQLNKWR 223
           E    P    GPA+   HP GP  H     T++ ILS+L+ ++ R
Sbjct: 392 ETAGTPAPEQGPAQAAGHPSGPLSHHHCAYTILHILSHLRPHEQR 436


>AB065941-1|BAC45263.1|  232|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 232

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 178 NIVDRMKVGPSGVHSLSCRSST*LRIFCYLMN 83
           NI+D +   P  + +L C S+  +++FCY ++
Sbjct: 187 NIIDHVVCDPGPLFALDCVSAPRIQLFCYTLS 218


>AB065607-1|BAC05834.1|  326|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 326

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -1

Query: 178 NIVDRMKVGPSGVHSLSCRSST*LRIFCYLMN 83
           NI+D +   P  + +L C S+  +++FCY ++
Sbjct: 187 NIIDHVVCDPGPLFALDCVSAPRIQLFCYTLS 218


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,298,341
Number of Sequences: 237096
Number of extensions: 575800
Number of successful extensions: 810
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 809
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 76,859,062
effective HSP length: 61
effective length of database: 62,396,206
effective search space used: 1372716532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)