Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0446
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   1.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   1.2  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    24   1.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   6.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   6.3  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 242 FTYLLNRATFVHIYVKVVEQFIFNHL 165
           FTY L   +F HI+  +VE  IF  L
Sbjct: 188 FTYFLGNMSFAHIFA-LVEYDIFKAL 212



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = -1

Query: 156 TLTILLYSISFNSIISSGWATVYVCTHIIKQLRFIYIFTMC 34
           T+  +L ++  + +    WA V++  HI+ Q   + +   C
Sbjct: 140 TVVFMLIALGEHWLSRYSWAKVFLVEHILVQTNKLVLALEC 180


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 242 FTYLLNRATFVHIYVKVVEQFIFNHL 165
           FTY L   +F HI+  +VE  IF  L
Sbjct: 188 FTYFLGNMSFAHIFA-LVEYDIFKAL 212



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = -1

Query: 156 TLTILLYSISFNSIISSGWATVYVCTHIIKQLRFIYIFTMC 34
           T+  +L ++  + +    WA V++  HI+ Q   + +   C
Sbjct: 140 TVVFMLIALGEHWLSRYSWAKVFLVEHILVQTNKLVLALEC 180


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 505 YSLVNNLIFIWNCHVQISKNKKTVD 579
           Y+LV+ ++ I  C V  S ++KT +
Sbjct: 220 YTLVSVILIIMGCDVVASNSRKTAE 244


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 429 SKPTLTKYTCVCYIPNKICELERE 500
           +KPT  K     Y   ++ ELERE
Sbjct: 83  TKPTAGKRARTAYTSAQLVELERE 106


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +3

Query: 429 SKPTLTKYTCVCYIPNKICELERE 500
           +KPT  K     Y   ++ ELERE
Sbjct: 74  TKPTAGKRARTAYTSAQLVELERE 97


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,209
Number of Sequences: 336
Number of extensions: 4448
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)