Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0446
         (780 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    26   1.5  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    26   1.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   6.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   8.0  

>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -1

Query: 708 KKKNPNIFICNGNSNNSAIFEYRENNSKEMI*CRFLRKFK*SRIYRLFVFRNLNMAIP 535
           K+ NP IF+  G  + S I +       E+I  R++R+F+    Y  + FR   + +P
Sbjct: 445 KEVNPFIFLPFGFGSRSCIGKRLAMMEMEVILARWIRQFEFRWNYEDYKFRTTVINMP 502


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +1

Query: 478  KSVS*REKSYSLVNNLIFIWNC 543
            KS+S  E+SY+ V  LI +W+C
Sbjct: 1031 KSLSGGERSYATVAFLIALWSC 1052


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 392 LTDTKLYNLVSLLKTNVNKVYVR 460
           +TDT +++LV + K   N V+VR
Sbjct: 15  ITDTNVHDLVEVKKIANNTVFVR 37


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
 Frame = -3

Query: 106  GLGNCLCMYSYHKTIKIY---LH--IYHVQTN 26
            G G  L  YSY  T K+Y    H  +Y  QTN
Sbjct: 1096 GAGFKLAKYSYQDTFKVYEMPRHAVVYDTQTN 1127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 781,787
Number of Sequences: 2352
Number of extensions: 15725
Number of successful extensions: 25
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)