Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0442
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   1.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   5.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.0  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   9.0  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 452 PLVDSFASTLNDESYTRPLWMPLLIKSIGE 541
           P V+SFA T+   S   PL+  L+ K   E
Sbjct: 737 PRVESFAETVRTVSKIPPLYKDLVAKRCEE 766


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 264 LYGEVQCCKRVALEKCNLQG 205
           +Y E QCCK  A    ++ G
Sbjct: 791 IYNEKQCCKNCARVDYSMNG 810


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 180 LSADAKEWYPANYTSQALPAYNTEPPHIDHLAPLYK 287
           L  + +E +  NY    L A  T   H++HL  +++
Sbjct: 446 LGTEVRE-FVVNYIDDLLVASETLNEHLEHLRQVFE 480


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 176 RFRSIHLWFV 147
           RFR++ LWFV
Sbjct: 354 RFRALKLWFV 363


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +3

Query: 63  DISAPKGRGRGWQMNNQA 116
           +I AP   G GWQ    A
Sbjct: 303 EIDAPSHAGNGWQWGPDA 320


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 626 GTRGIQTPQVAPLNRTLNTNEL 561
           G  G++ P ++ +NR L  NEL
Sbjct: 522 GVCGMKWPLLSTINRHLRGNEL 543


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 122  LACLVVHLPPP 90
            L CL V LPPP
Sbjct: 1326 LPCLAVGLPPP 1336


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 324  IWMTCLIHLKKLKTWIYG 377
            IW+  LIH KK+  ++ G
Sbjct: 1172 IWICSLIHRKKIVKFLDG 1189


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = +2

Query: 296 RQAQDQNPYNLDDMSYSLEEAENMDLRENIANLITVMCEITFDP 427
           R ++ Q+ + +      L   +N  LRE +    T  C    DP
Sbjct: 10  RASKGQDKHMVHWFRRGLRLHDNPSLREGLKGARTFRCVFVLDP 53


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 157 RWILLNRSYQQMLKNGTLQITLLKRYPLTTLNL 255
           +W LLN ++QQ+ K    +   +K Y    L L
Sbjct: 103 KWRLLNNNFQQIDKIFKTRDDRVKVYQAPVLQL 135


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,286
Number of Sequences: 336
Number of extensions: 3641
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)