Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0442
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125952-10|AAD14693.2| 352|Caenorhabditis elegans Seven tm rec... 31 0.55
AC006722-16|AAK68409.2| 308|Caenorhabditis elegans Hypothetical... 31 0.55
AF125952-7|AAD14695.1| 352|Caenorhabditis elegans Seven tm rece... 31 0.73
AC006722-13|AAK68415.2| 352|Caenorhabditis elegans Hypothetical... 31 0.73
AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical ... 29 2.9
Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical pr... 29 3.9
AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical... 28 6.8
Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z73428-2|CAA97806.2| 572|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z68012-1|CAA92016.1| 304|Caenorhabditis elegans Hypothetical pr... 27 9.0
AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidas... 27 9.0
AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical ... 27 9.0
AF304119-1|AAG50232.1| 326|Caenorhabditis elegans seven transme... 27 9.0
AF068718-6|AAC17769.2| 326|Caenorhabditis elegans Hypothetical ... 27 9.0
>AF125952-10|AAD14693.2| 352|Caenorhabditis elegans Seven tm
receptor protein 257 protein.
Length = 352
Score = 31.5 bits (68), Expect = 0.55
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 452 PLVDSFASTLNDESYTRPLWMPLLIKSIGEANFRYNGARLC 574
PLV + ST+ND Y PL+ P S + F + ARLC
Sbjct: 167 PLVKNL-STINDLYYVGPLFWPKYANSTTDHFFSWKAARLC 206
>AC006722-16|AAK68409.2| 308|Caenorhabditis elegans Hypothetical
protein Y19D10A.1 protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.55
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 452 PLVDSFASTLNDESYTRPLWMPLLIKSIGEANFRYNGARLC 574
PLV + ST+ND Y PL+ P S + F + ARLC
Sbjct: 149 PLVKNL-STINDLYYVGPLFWPKYANSTTDHFFSWKAARLC 188
>AF125952-7|AAD14695.1| 352|Caenorhabditis elegans Seven tm
receptor protein 258 protein.
Length = 352
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 452 PLVDSFASTLNDESYTRPLWMPLLIKSIGEANFRYNGARLC 574
PLV + ST+ND Y PL+ P S+ E F + AR C
Sbjct: 167 PLVKNL-STINDLYYVGPLFWPKYANSMTEHFFSWKAARSC 206
>AC006722-13|AAK68415.2| 352|Caenorhabditis elegans Hypothetical
protein Y19D10A.2 protein.
Length = 352
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 452 PLVDSFASTLNDESYTRPLWMPLLIKSIGEANFRYNGARLC 574
PLV + ST+ND Y PL+ P S+ E F + AR C
Sbjct: 167 PLVKNL-STINDLYYVGPLFWPKYANSMTEHFFSWKAARSC 206
>AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical
protein Y32B12B.5 protein.
Length = 451
Score = 29.1 bits (62), Expect = 2.9
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +3
Query: 441 PCVVPWWIHLLQH 479
PC++P W+H++QH
Sbjct: 124 PCIMPLWLHVIQH 136
>Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 496 YQTLVDAIVNQVNRRS*FPVQWSSFVFNVRFSGAT*GVCI 615
Y V I +++R+ P+ W+SF++N+ G T C+
Sbjct: 201 YVWAVHTINKLISKRTNNPLMWNSFIYNLTEDGRTHEKCL 240
>Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 496 YQTLVDAIVNQVNRRS*FPVQWSSFVFNVRFSGAT*GVCI 615
Y V I +++R+ P+ W+SF++N+ G T C+
Sbjct: 201 YVWAVHTINKLISKRTNNPLMWNSFIYNLTEDGRTHEKCL 240
>AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical
protein Y37E3.17a protein.
Length = 830
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -2
Query: 147 LKLP*AAGARVP-GCSFATPGLVLLEH*YHRY 55
L L A+G P G SF +PGLV H HRY
Sbjct: 55 LLLERASGVASPSGTSFHSPGLVSASHPAHRY 86
>Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 284 QGRLRQAQDQNPYNLDDMSYSLEEAENMDLR 376
+GRLR A ++N Y+++ + + L+EA+ L+
Sbjct: 154 KGRLRGAINKNAYSMETVEHILQEAQKHHLQ 184
>Z73428-2|CAA97806.2| 572|Caenorhabditis elegans Hypothetical
protein M142.2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 341 YSLEEAENMDLRENIANLITVMCEITFDPGKFDTLCGP 454
+++E E +D R +L MC+ F PG + +CGP
Sbjct: 200 FTVESFEQLD-RALADSLTWSMCKTEFRPGTPEIICGP 236
>Z68012-1|CAA92016.1| 304|Caenorhabditis elegans Hypothetical
protein T24D5.1 protein.
Length = 304
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 264 DHLAPLYKVDFVKLKIKIHTIWMTCLIHLK 353
DH LY + K+KI++ T+ ++ ++HL+
Sbjct: 251 DHAVTLYTLMSNKIKIELDTVLLSLILHLE 280
>AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidase
protein.
Length = 591
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 284 QGRLRQAQDQNPYNLDDMSYSLEEAENMDLR 376
+GRLR A ++N Y+++ + + L+EA+ L+
Sbjct: 154 KGRLRGAINKNAYSMETVEHILQEAQKHHLQ 184
>AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +2
Query: 284 QGRLRQAQDQNPYNLDDMSYSLEEAENMDLR 376
+GRLR A ++N Y+++ + + L+EA+ L+
Sbjct: 154 KGRLRGAINKNAYSMETVEHILQEAQKHHLQ 184
>AF304119-1|AAG50232.1| 326|Caenorhabditis elegans seven
transmembrane protein protein.
Length = 326
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 189 DAKEWYPANYTSQALPAYNTEPPHIDHLAPLYKVDFVKLKIKIHTI 326
D KEWYPA Y + + T + + PLY + F+ I I +I
Sbjct: 142 DIKEWYPACYNPR-IGYTKTMRCTYEVVFPLYSITFIHHLILIGSI 186
>AF068718-6|AAC17769.2| 326|Caenorhabditis elegans Hypothetical
protein R01B10.5 protein.
Length = 326
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 189 DAKEWYPANYTSQALPAYNTEPPHIDHLAPLYKVDFVKLKIKIHTI 326
D KEWYPA Y + + T + + PLY + F+ I I +I
Sbjct: 142 DIKEWYPACYNPR-IGYTKTMRCTYEVVFPLYSITFIHHLILIGSI 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,714,993
Number of Sequences: 27780
Number of extensions: 340450
Number of successful extensions: 926
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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