Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0441
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   4.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.1  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 94  YCILIICTGGRSTCEFSRVGTILPISALK 180
           Y + +   G    CEF R GT++ +  +K
Sbjct: 285 YTVNLGSLGYNEICEFHRNGTVVFLDDMK 313


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 356 MYKHYYASYDSHYLIL 403
           +Y H  A+YDS YL+L
Sbjct: 166 LYNHT-ANYDSKYLVL 180


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 5/15 (33%), Positives = 12/15 (80%)
 Frame = +1

Query: 67  YFLYISQCYYCILII 111
           Y+  +++CY C+L++
Sbjct: 39  YYPSLAKCYACLLMV 53


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 37  PQGLRQNQTHYFLYISQCYYCILII 111
           P+ L  ++   +LY   C +CI ++
Sbjct: 486 PKVLAMSRDQNYLYRMTCLFCINVL 510


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/12 (50%), Positives = 7/12 (58%)
 Frame = +3

Query: 6   WYANVGSIPWTP 41
           WY + G  PW P
Sbjct: 463 WYLDCGFGPWKP 474


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +1

Query: 91  YYCILIICTGGRSTC 135
           Y C+   C  G+ TC
Sbjct: 871 YKCVTCKCENGKPTC 885


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,757
Number of Sequences: 336
Number of extensions: 2575
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)