Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0441
         (498 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   0.62 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   7.6  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   7.6  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 26.2 bits (55), Expect = 0.62
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 165 RQDGTYP*ELASTPTTSTDN*YA 97
           R  G++P ELASTP    D+ Y+
Sbjct: 87  RMQGSFPPELASTPLEDIDSFYS 109


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
 Frame = -1

Query: 246 HLQHKCRHP-PGDMSSLNRNAFL 181
           HL+HK +HP P +M++ + N  L
Sbjct: 413 HLRHKSKHPIPINMNADDMNNIL 435


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 334 RQKDVIYFL*LKWMNALAAHLV 269
           + KD + F   KWM   A HL+
Sbjct: 29  KHKDNVKFYYQKWMEEQAQHLI 50


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 531,461
Number of Sequences: 2352
Number of extensions: 11426
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)