Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0440
         (341 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    23   1.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   4.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   4.6  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   4.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   4.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    20   6.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    20   8.1  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
          protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 75 RRIVRLRQETCSTHLPAQHSGLR 7
          + + RL Q+ CS  +  +H GL+
Sbjct: 7  KSVFRLDQDQCSHRIVREHLGLK 29


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 75  RRIVRLRQETCSTHLPAQHSGLR 7
           + + RL Q+ CS  +  +H GL+
Sbjct: 321 KSVFRLDQDQCSHRIVREHLGLK 343


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 75  RRIVRLRQETCSTHLPAQHSGLR 7
           + + RL Q+ CS  +  +H GL+
Sbjct: 554 KSVFRLDQDQCSHRIVREHLGLK 576


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -3

Query: 75  RRIVRLRQETCSTHLPAQHSGLR 7
           + + RL Q+ CS  +  +H GL+
Sbjct: 554 KSVFRLDQDQCSHRIVREHLGLK 576


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -1

Query: 173 SGVDGYWSDG 144
           +G++ +WSDG
Sbjct: 398 TGIENWWSDG 407


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -1

Query: 173 SGVDGYWSDG 144
           +G++ +WSDG
Sbjct: 399 TGIENWWSDG 408


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -1

Query: 173 SGVDGYWSDG 144
           +G++ +WSDG
Sbjct: 399 TGIENWWSDG 408


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 65  CGSGKRPAALICQLSTQGY 9
           CGSGK P     +   +GY
Sbjct: 868 CGSGKYPLINAMRQELEGY 886


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 6.1
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 44  QVSCLSRTILRLLLSPLKASPSRPTTA 124
           +VSC+S  +   L+      P+ P T+
Sbjct: 109 EVSCISEEVWSKLIETGNKPPTLPVTS 135


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 19.8 bits (39), Expect = 8.1
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 80  LLSPLKASPSRPTTAPW 130
           LLSP   +P++ +T+P+
Sbjct: 57  LLSPSGNTPNKSSTSPY 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,227
Number of Sequences: 336
Number of extensions: 682
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6664455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)