Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0440
         (341 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070676-1|AAL48147.1|  221|Drosophila melanogaster RH13984p pro...    30   0.90 
AE014297-502|AAF54091.1|  221|Drosophila melanogaster CG1252-PA ...    30   0.90 
AE001572-14|AAD19804.1|  221|Drosophila melanogaster cuticle pro...    30   0.90 
BT012444-1|AAS93715.1| 1657|Drosophila melanogaster RE75049p pro...    27   6.4  
AE014296-2281|AAF49814.2| 1657|Drosophila melanogaster CG10732-P...    27   6.4  

>AY070676-1|AAL48147.1|  221|Drosophila melanogaster RH13984p
           protein.
          Length = 221

 Score = 29.9 bits (64), Expect = 0.90
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 290 YIDAAAPVHYASPVHYA 340
           Y   AAP HYA+P HYA
Sbjct: 187 YATYAAPTHYAAPAHYA 203


>AE014297-502|AAF54091.1|  221|Drosophila melanogaster CG1252-PA
           protein.
          Length = 221

 Score = 29.9 bits (64), Expect = 0.90
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 290 YIDAAAPVHYASPVHYA 340
           Y   AAP HYA+P HYA
Sbjct: 187 YATYAAPTHYAAPAHYA 203


>AE001572-14|AAD19804.1|  221|Drosophila melanogaster cuticle
           protein protein.
          Length = 221

 Score = 29.9 bits (64), Expect = 0.90
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 290 YIDAAAPVHYASPVHYA 340
           Y   AAP HYA+P HYA
Sbjct: 187 YATYAAPTHYAAPAHYA 203


>BT012444-1|AAS93715.1| 1657|Drosophila melanogaster RE75049p protein.
          Length = 1657

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 97   FERRQQQPKNSAAQARDLQHSSASSALRATI 5
            FE++QQQ +    Q + LQHS     LR  +
Sbjct: 1351 FEQQQQQQQQQQQQNQQLQHSHEPHGLRKAL 1381


>AE014296-2281|AAF49814.2| 1657|Drosophila melanogaster CG10732-PA,
            isoform A protein.
          Length = 1657

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 97   FERRQQQPKNSAAQARDLQHSSASSALRATI 5
            FE++QQQ +    Q + LQHS     LR  +
Sbjct: 1351 FEQQQQQQQQQQQQNQQLQHSHEPHGLRKAL 1381


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,858,777
Number of Sequences: 53049
Number of extensions: 143099
Number of successful extensions: 699
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 699
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)