Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0439
(702 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 186 2e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 186 2e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 3e-30
SB_54| Best HMM Match : Actin (HMM E-Value=0) 100 1e-21
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 1e-21
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 83 3e-16
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 82 4e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 72 5e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 54 8e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 5e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.68
SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7) 31 1.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 30 1.6
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 1.6
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 2.1
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 30 2.1
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 30 2.1
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 30 2.1
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_17926| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 2.8
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_49314| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-30) 29 3.6
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 29 3.6
SB_18355| Best HMM Match : Extensin_2 (HMM E-Value=0.55) 29 4.8
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 4.8
SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1) 29 4.8
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 29 4.8
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 28 6.4
SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_19784| Best HMM Match : PHD (HMM E-Value=0.0006) 28 6.4
SB_17570| Best HMM Match : PHD (HMM E-Value=0.0006) 28 6.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.4
SB_2748| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7e-08) 28 6.4
SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32) 28 6.4
SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12) 28 8.4
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 28 8.4
SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032) 28 8.4
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 8.4
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 186 bits (452), Expect = 2e-47
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRT 149
Score = 130 bits (314), Expect = 1e-30
Identities = 60/63 (95%), Positives = 62/63 (98%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLT + TERG
Sbjct: 150 TGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERG 198
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 199 YSFTTTAEREIVRDI 213
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 186 bits (452), Expect = 2e-47
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRT 148
Score = 127 bits (307), Expect = 8e-30
Identities = 58/61 (95%), Positives = 61/61 (100%)
Frame = +2
Query: 71 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 250
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 251 R 253
R
Sbjct: 62 R 62
Score = 84.2 bits (199), Expect = 9e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 149 TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 198 YSFTTTAEREIVRDI 212
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 186 bits (452), Expect = 2e-47
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 120
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 121 QIMFETFNSPAMYVAIQAVLSLYASGRT 148
Score = 128 bits (310), Expect = 3e-30
Identities = 59/61 (96%), Positives = 61/61 (100%)
Frame = +2
Query: 71 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 250
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 251 R 253
R
Sbjct: 62 R 62
Score = 84.2 bits (199), Expect = 9e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 149 TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 197
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 198 YSFTTTAEREIVRDI 212
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 186 bits (452), Expect = 2e-47
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRT 149
Score = 134 bits (325), Expect = 5e-32
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 84.2 bits (199), Expect = 9e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 150 TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 199 YSFTTTAEREIVRDI 213
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 186 bits (452), Expect = 2e-47
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRT 149
Score = 130 bits (314), Expect = 1e-30
Identities = 58/63 (92%), Positives = 62/63 (98%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/24 (83%), Positives = 22/24 (91%), Gaps = 2/24 (8%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYE--GYA 575
TGIV+DSGDGVSHTVPIYE GY+
Sbjct: 150 TGIVMDSGDGVSHTVPIYEERGYS 173
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 172 YSFTTTAEREIVRDI 186
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 128 bits (310), Expect = 3e-30
Identities = 58/61 (95%), Positives = 61/61 (100%)
Frame = +2
Query: 71 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 250
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 251 R 253
R
Sbjct: 62 R 62
Score = 83.4 bits (197), Expect = 2e-16
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLT + TERG
Sbjct: 112 TGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERG 160
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +1
Query: 409 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 510
N + M +IMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRT 111
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTF 336
++ ILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 161 YSFTTTAEREIVRDI 175
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 100 bits (240), Expect = 1e-21
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +1
Query: 316 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 495
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 496 ASGRT 510
ASGRT
Sbjct: 2189 ASGRT 2193
Score = 72.1 bits (169), Expect = 4e-13
Identities = 33/49 (67%), Positives = 36/49 (73%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT TERG
Sbjct: 2194 TGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERG 2242
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 190
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 100 bits (240), Expect = 1e-21
Identities = 43/89 (48%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Frame = +1
Query: 241 TEQKSILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 417
++ + +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 418 KMTQIMFETFNTPAMYVAIQAVLSLYASG 504
KM ++MFE + +Y+AIQAVL+LYA G
Sbjct: 122 KMIEVMFENYQFEGVYIAIQAVLTLYAQG 150
Score = 66.9 bits (156), Expect = 1e-11
Identities = 26/39 (66%), Positives = 34/39 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTR 626
TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T+
Sbjct: 153 TGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITK 191
Score = 51.2 bits (117), Expect = 8e-07
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Frame = +2
Query: 83 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 253
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLR 65
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 82.6 bits (195), Expect = 3e-16
Identities = 34/49 (69%), Positives = 44/49 (89%)
Frame = +1
Query: 364 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 510
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRT
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRT 174
Score = 71.7 bits (168), Expect = 5e-13
Identities = 28/39 (71%), Positives = 38/39 (97%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTR 626
TG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++R
Sbjct: 175 TGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSR 213
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/49 (79%), Positives = 41/49 (83%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 28 TGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERG 76
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1
Query: 430 IMFETFNTPAMYVAIQAVLSLYASGRT 510
IMFE FN+PA+YVAIQAVLSLYASGRT
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRT 27
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 77 YSFTTTAEREIVRDI 91
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 71.7 bits (168), Expect = 5e-13
Identities = 29/79 (36%), Positives = 52/79 (65%)
Frame = +1
Query: 274 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 453
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 454 PAMYVAIQAVLSLYASGRT 510
PA ++ +VL+ +A+GR+
Sbjct: 63 PAFFLCKNSVLTAFANGRS 81
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +3
Query: 513 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERGTRSLPP 674
G+V+DSG + VP+++GY L AI+R LAG +T + E +PP
Sbjct: 83 GLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEETNVEVIPP 136
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 190
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +3
Query: 501 RSYTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERGTRSLPP 674
R+ TG V+DSGDGV+H +P+ EGY + I + +AGRD+T + ER +PP
Sbjct: 59 RTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER-EMGIPP 115
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +2
Query: 59 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 229
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 230 GDEAQSK 250
GD A +K
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 268 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 381
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 34.3 bits (75), Expect = 0.097
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 501 RSYTGIVLDSGDGVSHTVPI 560
R+ TG V+DSGDGV+H +P+
Sbjct: 353 RTLTGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 187 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 71
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.9 bits (69), Expect = 0.52
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 190 GRDGRYGTEGLLCRR*-GTEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 360
GR G + GL G+ + L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 361 EEHPVLLTEAPLNPKANRE 417
HPV++TE NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 162 GNTARGASSPAKPALHIPEPLSTT 91
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 162 GNTARGASSPAKPALHIPEPLSTT 91
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_31419| Best HMM Match : Laminin_EGF (HMM E-Value=7)
Length = 186
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = -2
Query: 368 CSSGATRSSL*KV*CQIFSMSSQLVTIPCSMG--YLRVRILFCSVPHLLHKSPSVPYRPS 195
CS + + C + ++V CS Y+ V + CS + H+ PS
Sbjct: 88 CSPSRAHVDVFPITCSCRCVPHRMVMSMCSPSRVYVDVSPIVCSCRCVPHRVLMSMCSPS 147
Query: 194 RPDGGAFPRSRGTRREEHHLLRNRPCTYRSH 102
R D FP + R HH+L + + R+H
Sbjct: 148 RADVDVFPITCSRRCVFHHVLMSMCSSSRAH 178
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 162 GNTARGASSPAKPALHIPEPLSTT 91
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 390 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 482
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 244 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 110
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 216 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 253 SILTLKYPIEHGIVTNWDDMEKIWHHTFYNE 345
S L P + G + NWD ++IW +TF E
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 77 EVAALVVDNGSGMCKAGFAGDDAPRAV 157
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 244 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 110
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 411 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -3
Query: 250 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 86
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 85 GNFFVAHLELVK 50
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 244 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 110
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 274 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 244 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 110
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 252 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 244 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 110
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 244 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 110
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 244 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 110
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 128 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_17926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1078
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +3
Query: 531 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTER---GTRSLPP 674
G + +PI G LPH R LA R+ R H +ER T+ LPP
Sbjct: 1010 GRPIKDFIPILPGRYLPHPTWRDTLALREALRNRHMQASERWAEHTKRLPP 1060
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3
Query: 244 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 110
+C ++LSH + H M D +HG RS SCET L T
Sbjct: 176 ICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 349 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTPVSCWT 528
++A + +P + E N K + +K+ Q M +T + + ++ +A + W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAF---ELPNWA 919
Query: 529 PATVSPTPCPSTKDTHSP-TPSCV 597
P PT P+ K T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_49314| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-30)
Length = 300
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 491 CTRPVVHRYRAGLRRRCLPHRAHLRRIRT-PPR 586
C PVV+ R+C+ H +R+RT PPR
Sbjct: 260 CCNPVVYSLHNPKLRKCMNRLVHHKRVRTSPPR 292
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 434 CSKHSTRPPCTSPSKPCSRCTRPVVHRYRAG 526
C H+ R P T+PS PC Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_18355| Best HMM Match : Extensin_2 (HMM E-Value=0.55)
Length = 247
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 464 TSPSKPCSRCTRPVVHRYRAGLRRRCLPHRAHLRRIRTPPRHPA 595
+SPS P ++ +P VH+Y + CLP + L PP +PA
Sbjct: 153 SSPSPP-TKPPKPSVHKYASDPELACLPQQTSL-----PPANPA 190
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 157 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKSILTLKYPIEHGIVTNW--DDMEKIWHH 330
V L + +GR+ G+ +CR+ + ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 331 TFYN 342
T N
Sbjct: 497 TCPN 500
>SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1)
Length = 461
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Frame = +3
Query: 378 AH*GSPQPQGQQREDDPDHVRNIQHARHVRRHP---SRALAVRVRSYTGIVLDSGDGVSH 548
+H G+ P P H + H RHP +++ V R T + S +H
Sbjct: 161 SHTGTKSPMLSTHGTTPSHGYQVNHGLRTVRHPHTGTKSTMVYARYDTLTRVPSHPCATH 220
Query: 549 TVPIYEGYALPHAI-LRLDLAGRDLTRLPHEDPTERGTR 662
GY + HA+ R D LTR+ + + +GT+
Sbjct: 221 GTTPSHGYQVTHALYARYD----TLTRVSSQPWSRQGTK 255
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/84 (23%), Positives = 34/84 (40%)
Frame = +1
Query: 331 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 510
T E VAPE + E ++P+ T + ET TP VA + ++ +
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 511 PVSCWTPATVSPTPCPSTKDTHSP 582
+ TV+P + + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 450 HARHVRRHPSRALAVRVRSYTGIVLDSGDGVSHTVPI 560
+ARH R PSR +R+ Y D DG++ ++ I
Sbjct: 42 NARHPRVEPSRCRGLRLLDYCSDKFDDDDGLTDSLDI 78
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 464 TSPSKPCSRCTRPVVHRYRAGLRRRCLPHRAHLRRIRTPPRHPA 595
+SPS P ++ +P VH+Y + CLP + L PP +PA
Sbjct: 258 SSPSPP-TKPPKPSVHKYASDPELACLPQQTSL-----PPANPA 295
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -1
Query: 282 FDGVFEGQDTLLLCASSPT*ESFCPIPTITP*WRGLPT 169
+DGV + + LLL +SSP S PI TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1800
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 458 PCTSPSKPCSRCTRPVVHRYRAGLRRRCLPHRAHLRRIRTPP 583
P PS+ CS C R + +RA L C ++H++ + P
Sbjct: 1003 PNPGPSEKCSVCLRTIARNHRAVL-CDCCKGQSHIKCVNVKP 1043
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 162 GNTARGASSPAKPALHIPEPLSTT 91
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_19784| Best HMM Match : PHD (HMM E-Value=0.0006)
Length = 198
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 458 PCTSPSKPCSRCTRPVVHRYRAGLRRRCLPHRAHLRRIRTPP 583
P PS+ CS C R + +RA L C ++H++ + P
Sbjct: 31 PNPGPSEKCSVCLRTIARNHRAVL-CDCCKGQSHIKCVNVKP 71
>SB_17570| Best HMM Match : PHD (HMM E-Value=0.0006)
Length = 243
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 458 PCTSPSKPCSRCTRPVVHRYRAGLRRRCLPHRAHLRRIRTPP 583
P PS+ CS C R + +RA L C ++H++ + P
Sbjct: 98 PNPGPSEKCSVCLRTIARNHRAVL-CDCCKGQSHIKCVNVKP 138
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 162 GNTARGASSPAKPALHIPEPLSTT 91
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_8127| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1623
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 458 PCTSPSKPCSRCTRPVVHRYRAGLRRRCLPHRAHLRRIRTPP 583
P PS+ CS C R + +RA L C ++H++ + P
Sbjct: 98 PNPGPSEKCSVCLRTIARNHRAVL-CDCCKGQSHIKCVNVKP 138
>SB_2748| Best HMM Match : Exo_endo_phos (HMM E-Value=1.7e-08)
Length = 438
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 458 PCTSPSKPCSRCTRPVVHRYRAGLRRRCLPHRAHLRRIRTPP 583
P PS+ CS C R + +RA L C ++H++ + P
Sbjct: 98 PNPGPSEKCSVCLRTIARNHRAVL-CDCCKGQSHIKCVNVKP 138
>SB_54423| Best HMM Match : RVT_1 (HMM E-Value=7.7e-32)
Length = 775
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 458 PCTSPSKPCSRCTRPVVHRYRAGLRRRCLPHRAHLRRIRTPP 583
P PS+ CS C R + +RA L C ++H++ + P
Sbjct: 98 PNPGPSEKCSVCLRTIARNHRAVL-CDCCKGQSHIKCVNVKP 138
>SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 458 PCTSPSKPCSRCTRPVVHRYRAGLRRRCLPHRAHLRRIRTPP 583
P PS+ CS C R + +RA L C ++H++ + P
Sbjct: 746 PNPGPSEKCSVCLRTIARNHRAVL-CDCCKGQSHIKCVNVKP 786
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 27.9 bits (59), Expect = 8.4
Identities = 22/95 (23%), Positives = 39/95 (41%)
Frame = +1
Query: 382 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTPVSCWTPATVSPTPCPS 561
T+ + ++ + T + T P++ + Q S+ +S + S + +P+ PS
Sbjct: 1870 TQVTPSVASSTQAATSVTPSTQGMPSVAPSTQMTPSVASSTQVTPSVASSTQAAPSVTPS 1929
Query: 562 TKDTHSPTPSCVWT*PVATSQDYLMKILPSAVLVH 666
T T S TPS A+S + PS H
Sbjct: 1930 TLMTPSVTPSTQAAPSAASSTQVAPSMAPSTQTGH 1964
>SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12)
Length = 185
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/79 (25%), Positives = 32/79 (40%)
Frame = +1
Query: 424 TQIMFETFNTPAMYVAIQAVLSLYASGRTPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 603
T I F+ + P A A L L SG ATV+P + D +SP + +
Sbjct: 26 TYIGFDLSDVPVPESAGTATLGLTRSGDVSGESLVTATVTPLTATAGTDYNSPVATNITF 85
Query: 604 *PVATSQDYLMKILPSAVL 660
TS ++ + I ++
Sbjct: 86 SASETSYNFTVNITDDVII 104
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 27.9 bits (59), Expect = 8.4
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 244 EQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLN 399
E I + + +E G W+D+ + HTF +L + A E +P L+E PLN
Sbjct: 37 ESTFINSREVKLEKGKNQAWEDLRSVNAHTFDVKLFKEADESYP--LSEKPLN 87
>SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032)
Length = 216
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 447 QHARHVRRHPSRALAVRVRSYTGIVLDSGDGVSHTVPIYEG 569
QH RHV S ++ S V D D + +P YEG
Sbjct: 25 QHERHVGHGKSEGERAQIDSLQKYVRDIFDHIDQIIPKYEG 65
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 508 TPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 603
TP +TP T S TP PS T S TP+ +T
Sbjct: 75 TPTPSYTPTT-SYTPTPSYTSTTSYTPTTSYT 105
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 538 VSPTPCPSTKDTHSPTPSCVWT*PVATSQD 627
VS TP + + H PTP C PV T +
Sbjct: 10 VSSTPSQMSAERHEPTPQCRLKFPVQTRHE 39
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,909,789
Number of Sequences: 59808
Number of extensions: 657562
Number of successful extensions: 2849
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 2323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2783
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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