Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0439
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 187 6e-48
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 187 6e-48
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 187 6e-48
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 187 6e-48
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 187 6e-48
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 187 6e-48
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 187 6e-48
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 187 6e-48
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 187 6e-48
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 187 6e-48
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 183 1e-46
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 136 2e-32
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 136 2e-32
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 134 4e-32
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 134 4e-32
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 129 2e-30
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 105 2e-23
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 102 3e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 82 4e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.012
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.012
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 32 0.46
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.8
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 2.4
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 5.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 5.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 5.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 5.6
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 5.6
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 28 7.4
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 28 7.4
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 28 7.4
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 28 7.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 7.4
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 9.8
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 27 9.8
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 27 9.8
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 27 9.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 136 bits (328), Expect = 2e-32
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 150 TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 199 YSFTTTAEREIVRDI 213
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 134 bits (325), Expect = 4e-32
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 85.0 bits (201), Expect = 5e-17
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 150 TGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 199 YSFTTTAEREIVRDI 213
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 136 bits (328), Expect = 2e-32
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 150 TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 199 YSFTTTAEREIVRDI 213
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 136 bits (328), Expect = 2e-32
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 150 TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 199 YSFTTTAEREIVRDI 213
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 187 bits (456), Expect = 6e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 136 bits (328), Expect = 2e-32
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 150 TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 199 YSFTTTAEREIVRDI 213
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 133 bits (321), Expect = 1e-31
Identities = 59/63 (93%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 85.0 bits (201), Expect = 5e-17
Identities = 41/49 (83%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 150 TGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 199 YSFTTTAEREIVRDI 213
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 136 bits (328), Expect = 2e-32
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 150 TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 199 YSFTTTAEREIVRDI 213
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 187 bits (456), Expect = 6e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 18 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 77
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 78 QIMFETFNTPAMYVAIQAVLSLYASGRT 105
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 106 TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 154
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 197 MVGMGQKDSYVGDEAQSKR 253
MVGMGQKDSYVGDEAQSKR
Sbjct: 1 MVGMGQKDSYVGDEAQSKR 19
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 155 YSFTTTAEREIVRDI 169
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 187 bits (456), Expect = 6e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 48 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 107
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 108 QIMFETFNTPAMYVAIQAVLSLYASGRT 135
Score = 97.5 bits (232), Expect = 8e-21
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +2
Query: 119 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 49
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 136 TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 184
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 185 YSFTTTAEREIVRDI 199
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 187 bits (456), Expect = 6e-48
Identities = 85/88 (96%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRT 149
Score = 136 bits (328), Expect = 2e-32
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG+VLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 150 TGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 199 YSFTTTAEREIVRDI 213
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 183 bits (446), Expect = 1e-46
Identities = 82/88 (93%), Positives = 86/88 (97%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMT
Sbjct: 61 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMT 120
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYV IQAVLSLYASGRT
Sbjct: 121 QIMFETFNTPAMYVNIQAVLSLYASGRT 148
Score = 129 bits (312), Expect = 2e-30
Identities = 59/61 (96%), Positives = 61/61 (100%)
Frame = +2
Query: 71 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 250
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 251 R 253
R
Sbjct: 62 R 62
Score = 81.8 bits (193), Expect = 4e-16
Identities = 39/49 (79%), Positives = 42/49 (85%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLD+GDGV+HTVPIYEGYALPHAI RLDLAGRDLT + TERG
Sbjct: 149 TGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERG 197
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
Y+FTTTAEREIVRDI
Sbjct: 198 YTFTTTAEREIVRDI 212
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 136 bits (328), Expect = 2e-32
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKI 321
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 136 bits (328), Expect = 2e-32
Identities = 62/63 (98%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKI 321
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 134 bits (325), Expect = 4e-32
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKI 321
++ ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 134 bits (325), Expect = 4e-32
Identities = 61/63 (96%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 244
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 245 SKR 253
SKR
Sbjct: 61 SKR 63
Score = 48.0 bits (109), Expect = 6e-06
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDM 312
++ ILTLKYPIEHGIVTNWDDM
Sbjct: 62 KRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 129 bits (311), Expect = 2e-30
Identities = 54/88 (61%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Frame = +1
Query: 250 KSILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 426
+ + +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+
Sbjct: 65 RGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSA 124
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
+I FETFN PA+Y+ +QAVLSLYA+GRT
Sbjct: 125 EIFFETFNVPALYIQMQAVLSLYATGRT 152
Score = 64.5 bits (150), Expect = 7e-11
Identities = 27/38 (71%), Positives = 34/38 (89%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 623
TG+VLDSGDGV+H VPI +G+A+ HAI R+DLAGRD+T
Sbjct: 153 TGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVT 190
Score = 60.9 bits (141), Expect = 9e-10
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S R
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNR 65
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 105 bits (253), Expect = 2e-23
Identities = 47/89 (52%), Positives = 66/89 (74%), Gaps = 1/89 (1%)
Frame = +1
Query: 241 TEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANRE 417
++ + +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NRE
Sbjct: 62 SQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNRE 121
Query: 418 KMTQIMFETFNTPAMYVAIQAVLSLYASG 504
KM Q+MFE + ++YVA+QAVL+LYA G
Sbjct: 122 KMFQVMFEQYGFNSIYVAVQAVLTLYAQG 150
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTR 626
TG+V+DSGDGV+H P+YEG+AL H RLD+AGRD+T+
Sbjct: 153 TGVVVDSGDGVTHICPVYEGFALHHLTRRLDIAGRDITK 191
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 253
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLR 65
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 102 bits (244), Expect = 3e-22
Identities = 45/80 (56%), Positives = 56/80 (70%)
Frame = +1
Query: 262 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 441
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 442 TFNTPAMYVAIQAVLSLYAS 501
+FN P +Y+A+QAVL+L AS
Sbjct: 140 SFNVPGLYIAVQAVLALTAS 159
Score = 54.4 bits (125), Expect = 7e-08
Identities = 21/41 (51%), Positives = 31/41 (75%)
Frame = +3
Query: 501 RSYTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 623
RS TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T
Sbjct: 168 RSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDIT 208
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 65 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 172
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 81.8 bits (193), Expect = 4e-16
Identities = 36/78 (46%), Positives = 52/78 (66%)
Frame = +1
Query: 277 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 456
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 457 AMYVAIQAVLSLYASGRT 510
A Y++ VLS +A GRT
Sbjct: 154 AYYLSKNVVLSCFAQGRT 171
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/37 (35%), Positives = 26/37 (70%)
Frame = +3
Query: 513 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 623
G+++DSG + VP+++GYA+ HA+++ + G +T
Sbjct: 173 GLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLIT 209
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 172
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 274 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 447
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 274 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 447
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = -2
Query: 326 CQIFSMSSQLVTIPC-SMGYLRVRILFCSVPHLLHKSPSVP-YRPSRPD 186
CQ+FS QLVT+ SMG ++++++ +P L KS + P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 251 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 96
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -2
Query: 251 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 96
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = -1
Query: 252 LLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATS 76
L++ +SS S TITP +G+PT N S+P P + STT A ++
Sbjct: 465 LVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATST 524
Query: 75 SS 70
+S
Sbjct: 525 AS 526
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 508 TPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVATS 621
TP + T T +PT +T T + TP+ T P T+
Sbjct: 142 TPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPTTTT 179
>Z71265-3|CAA95835.2| 403|Caenorhabditis elegans Hypothetical
protein M05B5.3 protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 496 ASGRTPVSCWTPATVSPTPCPS-TKDTHSPTPSCV 597
AS T VS + A +P P PS T +T S TPS V
Sbjct: 211 ASSETRVSIESDAPPNPAPPPSTTPETSSTTPSTV 245
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 348 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 473
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1230 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1274
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 144 ASSPAKPALHIPEPLSTTNAATSS 73
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 348 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 473
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 144 ASSPAKPALHIPEPLSTTNAATSS 73
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 348 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 473
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1231 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1275
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 144 ASSPAKPALHIPEPLSTTNAATSS 73
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +3
Query: 348 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQ---HARHVRRH 473
AC GT SPA GSP PQ D + N Q + VRRH
Sbjct: 1243 ACNSDGTGSPATIGSPVPQDLVNNDRVRSLVNTQTGEWSAMVRRH 1287
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 144 ASSPAKPALHIPEPLSTTNAATSS 73
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +3
Query: 357 PRGTPSPAH*GSP---QPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYTGIVLD 527
P+ T +P +P QP Q P+ NI+ A HV PS SY + D
Sbjct: 1814 PQETQAPIAPSNPEPVQPNPSQTVSIPEPTGNIEEAEHVDAKPSYP---GQSSYNNLEED 1870
Query: 528 SGDGVSHTVPIYEGYALPHA 587
+G +P E ++P A
Sbjct: 1871 HEEGHIAELPALEPVSVPTA 1890
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 518 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHKTTS*RSYRAR 655
R G R R+ RR RTPPR + R R ++ S S R+R
Sbjct: 81 RHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSR 126
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 518 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHKTTS*RSYRAR 655
R G R R+ RR RTPPR + R R ++ S S R+R
Sbjct: 81 RHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSR 126
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 518 RAGLRRRCLPHRAHLRRIRTPPRHPASGLSRSRPHKTTS*RSYRAR 655
R G R R+ RR RTPPR + R R ++ S S R+R
Sbjct: 81 RHGSRSPRRRSRSPRRRSRTPPRRRSRSRDRKRSRRSRSRSSSRSR 126
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 421 MTQIMFETFNTPAMYVAIQAVLSLYASGRTPVSCWTPATVSPTPCPSTKDTHSPTP 588
+ Q+M F A A S + T S + A+ +PTP PS++ T PTP
Sbjct: 127 LLQVMAMVFQEKCPVFARSAANSATNASATNPSAGSSASSTPTPYPSSQPT-MPTP 181
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 119 KAGFAGDDAPRAVFPSIVGRPRHQG 193
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 547 WETPSPESSTIPVYDRTRTARARLGWRRTW 458
W+TPS + T P R R RA + R+++
Sbjct: 1299 WQTPSAQQQTKPKTRRERALRAHMNRRKSF 1328
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 547 WETPSPESSTIPVYDRTRTARARLGWRRTW 458
W+TPS + T P R R RA + R+++
Sbjct: 1299 WQTPSAQQQTKPKTRRERALRAHMNRRKSF 1328
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +1
Query: 412 REKMTQIMFETFN------TPAMYVAIQAVLSLYASGRTPVSCWTPATVS 543
R++ Q+ F+T + TP + VA+ +S P+ CWTP S
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +1
Query: 169 RGKAPPSGRDGRYGTEG 219
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -2
Query: 503 PDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 408
P S TAW+ GV N+ N + IFS+L
Sbjct: 286 PYGLSIGTAWIFLLAPGVYNILNQLASIFSML 317
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +1
Query: 295 TNWD-DMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA--NREKMTQIMFETFNTPAMY 465
T WD D +++ F ++L APE+ ++L NP ++ +++ E ++
Sbjct: 152 TFWDYDNKRVHIEKFLSDLESAPEKSVIILHGCAHNPTGMDPTQEQWKLVAEVIKRKNLF 211
Query: 466 VAIQAVLSLYASGRTPVSCW 525
+ASG W
Sbjct: 212 TFFDIAYQGFASGDPAADAW 231
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 547 WETPSPESSTIPVYDRTRTARARLGWRRTW 458
W+TPS + T P R R RA + R+++
Sbjct: 1299 WQTPSAQQQTKPKTRRERALRAHMNRRKSF 1328
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +1
Query: 412 REKMTQIMFETFN------TPAMYVAIQAVLSLYASGRTPVSCWTPATVS 543
R++ Q+ F+T + TP + VA+ +S P+ CWTP S
Sbjct: 17 RKQQGQLAFDTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,222,031
Number of Sequences: 27780
Number of extensions: 444304
Number of successful extensions: 2079
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2070
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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