Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0439
(702 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 186 2e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 185 2e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 185 2e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 184 7e-47
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 183 9e-47
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 183 9e-47
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 183 9e-47
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 183 1e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 183 1e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 166 1e-41
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 162 2e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 161 4e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 112 2e-25
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 99 3e-21
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 1e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 72 4e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 1e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 61 6e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 51 9e-07
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.10
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 32 0.32
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 32 0.32
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 30 1.7
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 3.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 3.0
At3g28790.1 68416.m03593 expressed protein 28 5.2
At5g17440.1 68418.m02046 LUC7 N_terminus domain-containing prote... 28 6.9
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 28 6.9
At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase f... 28 6.9
At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identic... 28 6.9
At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identic... 28 6.9
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 28 6.9
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 9.1
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 27 9.1
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 2e-47
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRT 150
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 199
Score = 31.9 bits (69), Expect = 0.42
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTT+AEREIVRD+
Sbjct: 200 YSFTTSAEREIVRDV 214
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 2e-47
Identities = 84/88 (95%), Positives = 86/88 (97%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRT 150
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 85.4 bits (202), Expect = 3e-17
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERG 199
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRD+
Sbjct: 200 YSFTTTAEREIVRDM 214
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 185 bits (451), Expect = 2e-47
Identities = 84/88 (95%), Positives = 86/88 (97%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFNTPAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNTPAMYVAIQAVLSLYASGRT 150
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 85.4 bits (202), Expect = 3e-17
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERG 199
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRD+
Sbjct: 200 YSFTTTAEREIVRDM 214
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 184 bits (447), Expect = 7e-47
Identities = 83/88 (94%), Positives = 86/88 (97%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 122
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNVPAMYVAIQAVLSLYASGRT 150
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 85.8 bits (203), Expect = 2e-17
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERG 199
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
Y FTTTAEREIVRDI
Sbjct: 200 YMFTTTAEREIVRDI 214
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 183 bits (446), Expect = 9e-47
Identities = 81/88 (92%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRT 150
Score = 108 bits (259), Expect = 4e-24
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLT + TERG
Sbjct: 151 TGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERG 199
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
Y FTTTAEREIVRDI
Sbjct: 200 YMFTTTAEREIVRDI 214
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 183 bits (446), Expect = 9e-47
Identities = 81/88 (92%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRT 150
Score = 108 bits (259), Expect = 4e-24
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLT + TERG
Sbjct: 151 TGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERG 199
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
Y FTTTAEREIVRDI
Sbjct: 200 YMFTTTAEREIVRDI 214
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 183 bits (446), Expect = 9e-47
Identities = 81/88 (92%), Positives = 87/88 (98%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMT 122
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNSPAMYVAIQAVLSLYASGRT 150
Score = 108 bits (259), Expect = 4e-24
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/49 (81%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLT + TERG
Sbjct: 151 TGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERG 199
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
Y FTTTAEREIVRDI
Sbjct: 200 YMFTTTAEREIVRDI 214
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRT 150
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG 199
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 200 YSFTTTAEREIVRDI 214
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 82/88 (93%), Positives = 85/88 (96%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ ILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMT
Sbjct: 63 KRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMT 122
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETFN PAMYVAIQAVLSLYASGRT
Sbjct: 123 QIMFETFNAPAMYVAIQAVLSLYASGRT 150
Score = 112 bits (270), Expect = 2e-25
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT + TERG
Sbjct: 151 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG 199
Score = 33.9 bits (74), Expect = 0.10
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
YSFTTTAEREIVRDI
Sbjct: 200 YSFTTTAEREIVRDI 214
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 166 bits (404), Expect = 1e-41
Identities = 71/88 (80%), Positives = 82/88 (93%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
++ IL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMT
Sbjct: 64 RRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMT 123
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFE+F P+MY+ IQAVLSLY+SGRT
Sbjct: 124 QIMFESFAFPSMYIGIQAVLSLYSSGRT 151
Score = 104 bits (250), Expect = 5e-23
Identities = 45/60 (75%), Positives = 55/60 (91%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/49 (83%), Positives = 42/49 (85%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT + ERG
Sbjct: 152 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERG 200
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
Y++TT+AEREIVRDI
Sbjct: 201 YTYTTSAEREIVRDI 215
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 162 bits (393), Expect = 2e-40
Identities = 76/106 (71%), Positives = 86/106 (81%)
Frame = +1
Query: 193 RDGRYGTEGLLCRR*GTEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 372
RDG E + G + ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 373 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 510
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRT
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRT 139
Score = 76.6 bits (180), Expect = 2e-14
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERG 656
TG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLT E TERG
Sbjct: 140 TGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERG 188
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 253
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANR 53
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +2
Query: 656 YSFTTTAEREIVRDI 700
Y++TT+AEREIVRDI
Sbjct: 189 YTYTTSAEREIVRDI 203
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 161 bits (391), Expect = 4e-40
Identities = 70/88 (79%), Positives = 81/88 (92%)
Frame = +1
Query: 247 QKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 426
+ ILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMT
Sbjct: 18 RSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMT 77
Query: 427 QIMFETFNTPAMYVAIQAVLSLYASGRT 510
QIMFETF P+MY+ +QA LSL+ASGRT
Sbjct: 78 QIMFETFAVPSMYIGMQAALSLHASGRT 105
Score = 72.1 bits (169), Expect = 3e-13
Identities = 37/52 (71%), Positives = 39/52 (75%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERGTRS 665
TG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT + ERG S
Sbjct: 106 TGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGYTS 157
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 112 bits (269), Expect = 2e-25
Identities = 46/88 (52%), Positives = 63/88 (71%)
Frame = +1
Query: 241 TEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 420
+E + L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 421 MTQIMFETFNTPAMYVAIQAVLSLYASG 504
M + MFE +N +++ IQAVL+LYA G
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQG 147
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/38 (55%), Positives = 31/38 (81%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 623
TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T
Sbjct: 150 TGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHIT 187
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 253
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELR 63
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 98.7 bits (235), Expect = 3e-21
Identities = 45/94 (47%), Positives = 60/94 (63%)
Frame = +1
Query: 241 TEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 420
+ S L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE
Sbjct: 78 SRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREY 137
Query: 421 MTQIMFETFNTPAMYVAIQAVLSLYASGRTPVSC 522
+I+FETFN P +Y+A+ +VL+L A+G T C
Sbjct: 138 TGEILFETFNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERGTRSLPP 674
TG+V+D GDG +H VP+ EGY + I + +AG+D+T + ERG ++PP
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERG-ENIPP 226
Score = 35.9 bits (79), Expect = 0.026
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 86 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 172
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 86.6 bits (205), Expect = 1e-17
Identities = 36/78 (46%), Positives = 54/78 (69%)
Frame = +1
Query: 274 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 453
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 454 PAMYVAIQAVLSLYASGR 507
PA+++A VL+ +A+GR
Sbjct: 154 PALFMAKNPVLTSFATGR 171
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 175
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 510 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTERGTRSLPPPSGK 686
T +V+D G G + P+++GY L A++ L G LT + +G + P S K
Sbjct: 173 TSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFK 231
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 71.7 bits (168), Expect = 4e-13
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 274 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 450
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 451 TPAMYVAIQAVLSLYASGR 507
Y + QAVLSLYA GR
Sbjct: 117 VSGFYASEQAVLSLYAVGR 135
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 86 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 178
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/71 (45%), Positives = 44/71 (61%)
Frame = +1
Query: 208 GTEGLLCRR*GTEQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 387
G++ L RR +Q IL+ P + GIVT+WD ++ +W H F N L + P EHP+LL E
Sbjct: 72 GSQALNFRR---DQMEILS---PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAE 125
Query: 388 APLNPKANREK 420
PLN + REK
Sbjct: 126 PPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 74 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 175
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 61.3 bits (142), Expect = 6e-10
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 265 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 444
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 445 FNTPAMYVA-IQAVLSLYASGRTPVS 519
F ++Y+A Q+++ LY + R P S
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDS 146
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +3
Query: 432 HVRNIQHARHVRRHPSRALAVRVRSYTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 611
H +++ H R P L+ ++ +V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSILS---KTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 612 RDLT 623
+ T
Sbjct: 187 KAFT 190
Score = 32.7 bits (71), Expect = 0.24
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 181
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 50.8 bits (116), Expect = 9e-07
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +1
Query: 274 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 450
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 451 TPAMYVAIQAVLSLYASGRTPVSCWTPATVSPTPCPSTKDTHS 579
PA+ + A S Y + C V CP THS
Sbjct: 145 VPAVAFGVDAAFS-YKYNQLHGICKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 89 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 235
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 210 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 73
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Frame = +1
Query: 331 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 480
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 481 VLSLYASGRT 510
VL+LYA+ RT
Sbjct: 241 VLALYAARRT 250
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 32.3 bits (70), Expect = 0.32
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 10/70 (14%)
Frame = +1
Query: 331 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 480
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 481 VLSLYASGRT 510
VL+LYA+ RT
Sbjct: 241 VLALYAARRT 250
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 387 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSY 509
GSP+ +G + E+D D + NI+H + +H + A+ SY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSY 134
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 244 EQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 420
E L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +1
Query: 244 EQKSILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 420
E L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Frame = +1
Query: 496 ASGRTPVSCWTPATVSP---TPCPSTKDTHSPTPS 591
+SG +P TP +P TP PST +PTPS
Sbjct: 270 SSGASPSGSPTPTPSTPTPSTPTPSTPTPSTPTPS 304
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +1
Query: 526 TPATVSP-TPCPSTKDTHSPTPS 591
TP+T +P TP PST +PTPS
Sbjct: 287 TPSTPTPSTPTPSTPTPSTPTPS 309
>At5g17440.1 68418.m02046 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: Protein of unknown
function, DUF259
Length = 404
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 585 AILRLDLAGRDLTRLPHEDPTERGTRSLPPPSGKS 689
A+L LD +D T L P ++ +LPPP ++
Sbjct: 172 AVLLLDAFNKDRTSLQQAVPAQQPAATLPPPDPRT 206
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.9 bits (59), Expect = 6.9
Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 7/97 (7%)
Frame = +3
Query: 381 H*GSPQPQGQQREDDPDHVRN-------IQHARHVRRHPSRALAVRVRSYTGIVLDSGDG 539
H GSP+ +G + EDD D + N ARH R + + R S +L G
Sbjct: 91 HRGSPRVEGDEDEDDVDDIENEFNYAQGANKARHQRHGEEFSSSSRHESQPIPLLTHGHT 150
Query: 540 VSHTVPIYEGYALPHAILRLDLAGRDLTRLPHEDPTE 650
VS + + ++ L + R+ P+ DP +
Sbjct: 151 VSGEIRTPDTQSVRTTSGPLGPSDRNAISSPYIDPRQ 187
>At4g31670.1 68417.m04497 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 15 (UBP15)
[Arabidopsis thaliana] GI:11993475; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 631
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 457 AMYVAIQAVLSLYASGRTPVSCWTPATVSPTPCPSTKDTHSPTPS 591
+M AI++ S +A+ PV +P SP+P PS + SP+PS
Sbjct: 509 SMVGAIESRSSTHATIEDPVCEQSP---SPSPSPSPSPSPSPSPS 550
>At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identical
to gi_11935086_gb_AAG41963
Length = 162
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 451 TPAMYVAIQAVLSLYASGRTPVSCWTPATVSPTPCPSTKDTHSPTPS 591
+PA+ A S A +TPV A SPTP ST P PS
Sbjct: 43 SPAISPAAPTPESTEAPAKTPVEAPVEAPPSPTPA-STPQISPPAPS 88
>At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identical
to gi_11935086_gb_AAG41963
Length = 185
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 451 TPAMYVAIQAVLSLYASGRTPVSCWTPATVSPTPCPSTKDTHSPTPS 591
+PA+ A S A +TPV A SPTP ST P PS
Sbjct: 43 SPAISPAAPTPESTEAPAKTPVEAPVEAPPSPTPA-STPQISPPAPS 88
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 509 HRYRAGLRRRCL-PHRAHLRRIRTPPRHPASG 601
+ ++AG R R L P + L +R PPR PA+G
Sbjct: 601 YTFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 186 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 64
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Frame = +1
Query: 496 ASGRT----PVSCWTPATVSPTPCPSTKDT-HSPTPSC 594
A GRT P+SC TP PCP + HS T C
Sbjct: 639 ACGRTSIPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,476,311
Number of Sequences: 28952
Number of extensions: 425304
Number of successful extensions: 1489
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1475
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1506636208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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