BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0434
(299 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5CU53 Cluster: Secreted insulinase like peptidase; n=2... 34 0.54
UniRef50_A7RGB1 Cluster: Predicted protein; n=1; Nematostella ve... 32 2.9
UniRef50_Q76BS7 Cluster: Aerobactin synthetase; n=2; Vibrio|Rep:... 31 6.7
>UniRef50_Q5CU53 Cluster: Secreted insulinase like peptidase; n=2;
Cryptosporidium|Rep: Secreted insulinase like peptidase
- Cryptosporidium parvum Iowa II
Length = 1215
Score = 34.3 bits (75), Expect = 0.54
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -1
Query: 248 VQKKLCLSTYFLCSHSNHCNGISMCNG 168
VQ+ LCL TY HSN CN I NG
Sbjct: 128 VQESLCLGTYRFFDHSNFCNFIISING 154
>UniRef50_A7RGB1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 770
Score = 31.9 bits (69), Expect = 2.9
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = -1
Query: 233 CLSTYFLCSHSNHCNGIS-MCNGIA 162
C STYFLC +S+HC +C+G+A
Sbjct: 122 CASTYFLCPNSSHCIPRRWLCDGLA 146
>UniRef50_Q76BS7 Cluster: Aerobactin synthetase; n=2; Vibrio|Rep:
Aerobactin synthetase - Vibrio mimicus
Length = 598
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 129 LELYYTRLNVTCYTITHANAITMITMTAEKICAKAEFFLHPYNFNFGS 272
+E+ Y LN + + +T+E +C K FF + NFN S
Sbjct: 527 IEILYHNLNALLQSGVKDDLCLRYVLTSEALCCKGNFFCYLQNFNENS 574
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 271,143,505
Number of Sequences: 1657284
Number of extensions: 4310787
Number of successful extensions: 9105
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9103
length of database: 575,637,011
effective HSP length: 76
effective length of database: 449,683,427
effective search space used: 10342718821
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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