Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0434
         (299 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   1.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   2.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   3.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   5.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   5.0  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    19   8.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     19   8.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    19   8.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 214 RKYVLRQSFFCTLIILISVHIRTIL 288
           RK VL+ + +C  IIL  + +  IL
Sbjct: 312 RKTVLKTNKYCNFIILFYLSVFVIL 336


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 2.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +2

Query: 62  AHILPDWNRSPMTI 103
           AHI+P+ +R+P+ I
Sbjct: 166 AHIVPEGSRTPIEI 179


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 220 YVLRQSFFCTLIILISVH 273
           + +   F+C LIIL+ ++
Sbjct: 222 FTIHLLFYCVLIILLCIY 239



 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 238 FFCTLIILISVH 273
           F+C LIIL+ ++
Sbjct: 288 FYCALIILLCIY 299


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
 Frame = +3

Query: 156 VTCYTITHANAITMITMTA------EKICAKAEFFLHPYNFNFGSYTHYIGQ 293
           +  YT++  + + +I   A      +K C   ++       N G Y +++ Q
Sbjct: 168 IVLYTLSKMSQVMLIQFCAFVVVLKQKFCVVNQYIKQVCKLNNGHYKNFLSQ 219


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 1/17 (5%)
 Frame = +2

Query: 170 HYTC*CHYN-DYYDCRE 217
           HYTC C Y     DC E
Sbjct: 82  HYTCHCPYGYTGKDCGE 98


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +2

Query: 80  WNRSPMTISIEKASSLIRIILYKA 151
           WN   +  S   ASS +R +  K+
Sbjct: 101 WNEGSVNYSKMAASSSLRAVFIKS 124


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = +3

Query: 264 FGSYTHYIGQD 296
           FG + H++G D
Sbjct: 251 FGRFKHFVGAD 261


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 6/32 (18%), Positives = 14/32 (43%)
 Frame = +3

Query: 198 ITMTAEKICAKAEFFLHPYNFNFGSYTHYIGQ 293
           + +  +K C   ++       N G Y +++ Q
Sbjct: 13  VVVLKQKFCVVNQYIKQVCKLNNGHYKNFLSQ 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,834
Number of Sequences: 336
Number of extensions: 1398
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5429307
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)