Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0434
         (299 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70034-3|CAA93860.2|  620|Caenorhabditis elegans Hypothetical pr...    29   0.47 
Z70034-2|CAA93854.3|  623|Caenorhabditis elegans Hypothetical pr...    28   1.1  
AL033510-4|CAA22070.2|  343|Caenorhabditis elegans Hypothetical ...    27   2.5  
Z66522-3|CAA91408.1|  281|Caenorhabditis elegans Hypothetical pr...    26   5.8  
AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical...    26   5.8  
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical...    26   5.8  
Z72508-9|CAA96639.2|  410|Caenorhabditis elegans Hypothetical pr...    25   7.6  
M98552-7|AAK82925.2|  355|Caenorhabditis elegans Hypothetical pr...    25   7.6  
AF000266-10|AAC71174.2|  124|Caenorhabditis elegans Hypothetical...    25   7.6  

>Z70034-3|CAA93860.2|  620|Caenorhabditis elegans Hypothetical
           protein C18E9.3b protein.
          Length = 620

 Score = 29.5 bits (63), Expect = 0.47
 Identities = 11/41 (26%), Positives = 24/41 (58%)
 Frame = +3

Query: 105 PSRKPAH*LELYYTRLNVTCYTITHANAITMITMTAEKICA 227
           PSR P     + ++ +++ C+T TH ++++   M+ E + A
Sbjct: 28  PSRAPLILPPVLFSLIHIFCFTATHISSVSNCVMSKENVVA 68


>Z70034-2|CAA93854.3|  623|Caenorhabditis elegans Hypothetical
           protein C18E9.3a protein.
          Length = 623

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 10/39 (25%), Positives = 23/39 (58%)
 Frame = +3

Query: 105 PSRKPAH*LELYYTRLNVTCYTITHANAITMITMTAEKI 221
           PSR P     + ++ +++ C+T TH ++++   M+ E +
Sbjct: 28  PSRAPLILPPVLFSLIHIFCFTATHISSVSNCVMSKENV 66


>AL033510-4|CAA22070.2|  343|Caenorhabditis elegans Hypothetical
           protein Y40H7A.6 protein.
          Length = 343

 Score = 27.1 bits (57), Expect = 2.5
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -2

Query: 280 CVYEPKLKL*GCKKNSALAHIFSAVIVIIVMALACVMV 167
           C Y P+L L   +K + L  +F+ +  ++++ L C +V
Sbjct: 186 CQYPPQLALGAFQKMTHLKIVFTILNCVVILILLCFIV 223


>Z66522-3|CAA91408.1|  281|Caenorhabditis elegans Hypothetical
           protein F14E5.5 protein.
          Length = 281

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 222 CAKAEFFLHPYNFNFGSYTHYIGQD 296
           CA A+F  H YNF  G +   I  D
Sbjct: 17  CAHAKFHTHFYNFLLGKFGKPIADD 41


>AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical
           protein W02D3.10b protein.
          Length = 946

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 62  AHILPDWNRSPMTISIEKASSLIRII 139
           A ++P+W +S MT+SI     ++  I
Sbjct: 693 ARMIPEWKKSEMTVSIGNIVQIVEPI 718


>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
           protein W02D3.10a protein.
          Length = 1437

 Score = 25.8 bits (54), Expect = 5.8
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 62  AHILPDWNRSPMTISIEKASSLIRII 139
           A ++P+W +S MT+SI     ++  I
Sbjct: 693 ARMIPEWKKSEMTVSIGNIVQIVEPI 718


>Z72508-9|CAA96639.2|  410|Caenorhabditis elegans Hypothetical
           protein F28H7.8 protein.
          Length = 410

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 110 RWILSSDFYSSPVVYVLVKHL 48
           RW+ S+DF     V++L KHL
Sbjct: 42  RWLQSNDFNIPKTVHLLKKHL 62


>M98552-7|AAK82925.2|  355|Caenorhabditis elegans Hypothetical
           protein ZK370.7 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -3

Query: 153 LALYSIILISELAFSMDIVIGLLFQSGSICAR*ASDLY 40
           +++  ++++S L F  DI IG+ F  G+IC   A  LY
Sbjct: 314 VSIILVVVLSMLIFP-DIFIGMYFVLGTICVVLAVLLY 350


>AF000266-10|AAC71174.2|  124|Caenorhabditis elegans Hypothetical
           protein W08F4.10 protein.
          Length = 124

 Score = 25.4 bits (53), Expect = 7.6
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +3

Query: 27  YLTPYKGQMLNEHIYYRTGIEV 92
           YL+ + G  LNE I Y  G+EV
Sbjct: 60  YLSEFSGTHLNEFIRYCDGLEV 81


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,367,695
Number of Sequences: 27780
Number of extensions: 108878
Number of successful extensions: 270
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)