Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0433
         (587 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    27   0.12 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   1.4  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.4  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    23   2.5  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   3.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   7.7  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -3

Query: 582 YERPCGIPETTYNFHHEVQR 523
           Y+ P G+PE  Y+F+ EV++
Sbjct: 278 YQYPFGLPEYEYSFYQEVKK 297


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 224 AGCWRQRRAVL*KHLLCTMEGP 289
           A CW Q +AVL + +L   + P
Sbjct: 391 ASCWAQFKAVLWRSILAVFKEP 412


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 224 AGCWRQRRAVL*KHLLCTMEGP 289
           A CW Q +AVL + +L   + P
Sbjct: 391 ASCWAQFKAVLWRSILAVFKEP 412


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 355 STDPYGVLPLWRSNDLN 405
           + DPYG++  W ++ LN
Sbjct: 141 AVDPYGLVAQWATDALN 157


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/33 (24%), Positives = 14/33 (42%)
 Frame = +2

Query: 431 VISFCIRSAIPGYMVVPPDNTGLAYKPYGCSRC 529
           +  +C R     Y ++  + T    +PY C  C
Sbjct: 81  ICKYCNRQFTKSYNLLIHERTHTDERPYSCDIC 113


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 335 LPSNRCGSRNRSTTSLAP 282
           LP++RC SR  S + + P
Sbjct: 79  LPNSRCNSRESSDSLVQP 96


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 468  TWWYHRTIRGWRTSLT 515
            TWW   T   W T+ T
Sbjct: 1041 TWWSSTTTSPWWTTTT 1056


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/33 (30%), Positives = 14/33 (42%)
 Frame = -2

Query: 565 HPRDHI*LPS*SAT*TSVRLVRQPRIVRWYHHV 467
           H  DH  L S      S   +R P   RW+ ++
Sbjct: 374 HDPDHRHLESFGVMGDSATAMRDPIFYRWHSYI 406


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,260
Number of Sequences: 336
Number of extensions: 2782
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)