Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0433
(587 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 3e-44
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 3e-44
SB_56| Best HMM Match : Actin (HMM E-Value=0) 175 3e-44
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 174 4e-44
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 151 4e-37
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 58 7e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 55 4e-08
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_27191| Best HMM Match : Lysis_S (HMM E-Value=5.6) 29 3.7
SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_30449| Best HMM Match : DUF566 (HMM E-Value=1.2) 27 8.6
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 8.6
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 175 bits (426), Expect = 2e-44
Identities = 84/103 (81%), Positives = 90/103 (87%)
Frame = -3
Query: 567 GIPETTYNFHHEVQREHP*GLYANPVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 388
GI ETTYN + + LYAN V+SGGTTMYPG+ADRMQKEI+ALAPSTMKIKIIAP
Sbjct: 247 GIHETTYNSIMKCDVDIRKDLYANTVMSGGTTMYPGLADRMQKEISALAPSTMKIKIIAP 306
Query: 387 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHSKCF 259
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVH KCF
Sbjct: 307 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 349
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 175 bits (425), Expect = 3e-44
Identities = 85/103 (82%), Positives = 89/103 (86%)
Frame = -3
Query: 567 GIPETTYNFHHEVQREHP*GLYANPVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 388
GI ETTYN + + LYAN VLSGGTTMYPGIADRMQKEI+ALAP TMKIKIIAP
Sbjct: 236 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEISALAPPTMKIKIIAP 295
Query: 387 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHSKCF 259
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGP+IVH KCF
Sbjct: 296 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPAIVHRKCF 338
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 175 bits (425), Expect = 3e-44
Identities = 85/103 (82%), Positives = 89/103 (86%)
Frame = -3
Query: 567 GIPETTYNFHHEVQREHP*GLYANPVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 388
GI ETTYN + + LYAN VLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAP
Sbjct: 274 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAP 333
Query: 387 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHSKCF 259
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH KCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 175 bits (425), Expect = 3e-44
Identities = 85/103 (82%), Positives = 89/103 (86%)
Frame = -3
Query: 567 GIPETTYNFHHEVQREHP*GLYANPVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 388
GI ETTYN + + LYAN VLSGG+TMYPGIADRMQKEIT+LAP TMKIKIIAP
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITSLAPPTMKIKIIAP 332
Query: 387 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHSKCF 259
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH KCF
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 174 bits (424), Expect = 4e-44
Identities = 85/103 (82%), Positives = 89/103 (86%)
Frame = -3
Query: 567 GIPETTYNFHHEVQREHP*GLYANPVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 388
GI ETTYN + + LYAN VLSGG+TMYPGIADRMQKEI+ALAP TMKIKIIAP
Sbjct: 274 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPPTMKIKIIAP 333
Query: 387 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHSKCF 259
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH KCF
Sbjct: 334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 173 bits (420), Expect = 1e-43
Identities = 84/103 (81%), Positives = 89/103 (86%)
Frame = -3
Query: 567 GIPETTYNFHHEVQREHP*GLYANPVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 388
GI ETTYN + + LYAN VLSGG+TM+PGIADRMQKEI+ALAP TMKIKIIAP
Sbjct: 273 GIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEISALAPPTMKIKIIAP 332
Query: 387 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHSKCF 259
PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVH KCF
Sbjct: 333 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 151 bits (366), Expect = 4e-37
Identities = 74/109 (67%), Positives = 85/109 (77%)
Frame = -3
Query: 585 GYERPCGIPETTYNFHHEVQREHP*GLYANPVLSGGTTMYPGIADRMQKEITALAPSTMK 406
G E P GI E YN + + LY+N VLSGG+TM+PGIADRMQKEI LA ++MK
Sbjct: 42 GMEAP-GIHEAIYNCIMKCDVDIRKDLYSNCVLSGGSTMFPGIADRMQKEIAMLANASMK 100
Query: 405 IKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHSKCF 259
+K+IAPPERKYSVWIGGSILASLSTFQQMWI+K+EY E GP IVH KCF
Sbjct: 101 VKVIAPPERKYSVWIGGSILASLSTFQQMWIAKEEYHEYGPPIVHRKCF 149
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 57.6 bits (133), Expect = 7e-09
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Frame = -3
Query: 507 LYANPVLSGGTTMYPGIADRMQKEITA----------------LAPSTMKIKIIAPPERK 376
LY N VLSGG+TM+ R+Q++I + P ++ ++I+ ++
Sbjct: 242 LYKNIVLSGGSTMFRDFGRRLQRDIKRTVDARLKMSETLSGGRIKPKPIETQVISHHMQR 301
Query: 375 YSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHSKCF 259
Y+VW GGS+LAS F + +K +YDE GPSI F
Sbjct: 302 YAVWFGGSMLASTPEFYSVCHTKADYDEHGPSICRHNPF 340
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 55.2 bits (127), Expect = 4e-08
Identities = 23/61 (37%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Frame = -3
Query: 510 GLYANPVLSGGTTMYPGIADRMQKEITALAPSTMKIKII---APPERKYSVWIGGSILAS 340
GL+ + +++GG T+ G +R+ +E+ + P +M++K+I + E++++ WIGGSILAS
Sbjct: 170 GLFNSVIVTGGNTLLQGFVERLNRELVSKTPPSMRLKLISNNSSVEKRFNPWIGGSILAS 229
Query: 339 L 337
L
Sbjct: 230 L 230
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = -3
Query: 507 LYANPVLSGGTTMYPGIADRMQKEITA-LAPSTMKIKIIAPPERKYSVWIGGSILAS-LS 334
LY VL G T+ Q +TA KI+I PP RK+ V++GG++LA +
Sbjct: 324 LYLERVLKGDTSKLSSGMGMEQIPLTADYLLQKFKIRIEDPPRRKHMVFMGGAVLADIMK 383
Query: 333 TFQQMWISKQEYDESG 286
W++++EY+E G
Sbjct: 384 DKDSFWMTRKEYEEKG 399
>SB_22343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 9/81 (11%)
Frame = -3
Query: 507 LYANPVLSGGTTMYPGIADRMQKEITALAPS--------TMKIKIIAPP-ERKYSVWIGG 355
L N VL GGT M PG R+ +EI L S +K+ PP + W+GG
Sbjct: 77 LAENIVLIGGTAMTPGFKHRLMQEIYLLLQSPKYKDKLFIKTVKMHQPPVNANITAWLGG 136
Query: 354 SILASLSTFQQMWISKQEYDE 292
+I SL +++ Y +
Sbjct: 137 AIFGSLEVLADRSTTRERYQQ 157
>SB_27191| Best HMM Match : Lysis_S (HMM E-Value=5.6)
Length = 181
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -3
Query: 402 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHS 268
K++ + KY + I G+ L+ F ISK EY P+I +S
Sbjct: 50 KVVVIVDYKYELDIRGTKFGELTGFDPKVISKTEYGSKLPNITNS 94
>SB_38754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 498 NPVLSGGTTMYPGIADRMQKEITALAP 418
N ++GG TMY R+++E+ A+ P
Sbjct: 132 NVFVTGGNTMYNNFMARLERELLAIRP 158
>SB_30449| Best HMM Match : DUF566 (HMM E-Value=1.2)
Length = 415
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -3
Query: 396 IAPPERKYSVWIGGSILASLSTFQQMWISKQE-----YDESGPSIVHS 268
I PP+ Y ++GGSI SL+ + + Q+ Y E+G + HS
Sbjct: 125 IDPPQVTYQDYLGGSINRSLTCTPAVTTTSQDSRPPSYPETGARVSHS 172
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = -3
Query: 396 IAPPERKYSVWIGGSILASLSTFQQMWISKQE-----YDESGPSIVHS 268
I PP+ Y ++GGSI SL+ + + Q+ Y E+G + HS
Sbjct: 744 IDPPQVTYQDYLGGSINRSLTCTPAITTTSQDSRPPSYPETGARVSHS 791
>SB_42882| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 1973
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 350 IDPPIHTEYFLSGGAMILIFIVDGARAVISFCIRSAIPGYMV-VPPD 487
+DPP+ +Y L+GG ++ + FCI G++V PP+
Sbjct: 758 LDPPLENKYNLNGGQQVIQSTLQIQSLFFPFCI---FQGFVVPTPPE 801
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,625,214
Number of Sequences: 59808
Number of extensions: 365972
Number of successful extensions: 1067
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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