Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0432
         (434 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC100785-1|AAI00786.1|  220|Homo sapiens LHFPL1 protein protein.       29   5.2  
AY358208-1|AAQ88575.1|  243|Homo sapiens VTYC5824 protein.             29   5.2  
AY217350-1|AAO60107.1|  220|Homo sapiens lipoma HMGIC fusion par...    29   5.2  

>BC100785-1|AAI00786.1|  220|Homo sapiens LHFPL1 protein protein.
          Length = 220

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 304 AQLLGRAIGAGLFAITPLAKGGCAARRLSWVTPGFSQS 191
           ++++GR +GA  F    L   GCA   L W +P   Q+
Sbjct: 113 SRMMGRCMGAAQFVGGLLISSGCALYPLGWNSPEIMQT 150


>AY358208-1|AAQ88575.1|  243|Homo sapiens VTYC5824 protein.
          Length = 243

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 304 AQLLGRAIGAGLFAITPLAKGGCAARRLSWVTPGFSQS 191
           ++++GR +GA  F    L   GCA   L W +P   Q+
Sbjct: 136 SRMMGRCMGAAQFVGGLLISSGCALYPLGWNSPEIMQT 173


>AY217350-1|AAO60107.1|  220|Homo sapiens lipoma HMGIC fusion
           partner-like 1 protein.
          Length = 220

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 304 AQLLGRAIGAGLFAITPLAKGGCAARRLSWVTPGFSQS 191
           ++++GR +GA  F    L   GCA   L W +P   Q+
Sbjct: 113 SRMMGRCMGAAQFVGGLLISSGCALYPLGWNSPEIMQT 150


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,317,296
Number of Sequences: 237096
Number of extensions: 1487359
Number of successful extensions: 6872
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6872
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)