Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0425
         (443 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.24 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   5.2  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 300 IVTNWDDMEKIWHHTFYNELRVAPDEHPVLLT 395
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 257 QKRYPDPQIPHRTRNRN*LG 316
           QKR+P   IP    +RN +G
Sbjct: 418 QKRHPFAYIPFSAGSRNCIG 437


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 270 GYLFCLSLISY 238
           GYLFC SL  Y
Sbjct: 71  GYLFCASLSFY 81


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 257 QKRYPDPQIPHRTRNRN*LG 316
           QKR+P   IP    +RN +G
Sbjct: 418 QKRHPFAYIPFSAGSRNCIG 437


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,683
Number of Sequences: 336
Number of extensions: 2204
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)