Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0425
(443 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_56| Best HMM Match : Actin (HMM E-Value=0) 136 1e-32
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 136 1e-32
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 1e-32
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 1e-28
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 5e-12
SB_54| Best HMM Match : Actin (HMM E-Value=0) 61 5e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 58 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 52 3e-07
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 47 8e-06
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 46 1e-05
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 38 0.005
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.046
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 31 0.43
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 29 1.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.0
SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06) 28 4.0
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 28 4.0
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_56634| Best HMM Match : Pox_A32 (HMM E-Value=0.011) 27 5.3
SB_18995| Best HMM Match : rve (HMM E-Value=0.0012) 27 5.3
SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_18108| Best HMM Match : HA (HMM E-Value=0.059) 27 9.2
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 136 bits (328), Expect = 1e-32
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 124 bits (298), Expect = 4e-29
Identities = 56/62 (90%), Positives = 60/62 (96%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
M D+E+AALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 136 bits (328), Expect = 1e-32
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 435 THI 443
T I
Sbjct: 120 TQI 122
Score = 121 bits (291), Expect = 3e-28
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
+++VAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ+K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 136 bits (328), Expect = 1e-32
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 435 THI 443
T I
Sbjct: 120 TQI 122
Score = 122 bits (294), Expect = 1e-28
Identities = 55/60 (91%), Positives = 59/60 (98%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
++EVAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ+K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 136 bits (328), Expect = 1e-32
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 128 bits (309), Expect = 2e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD++VAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 136 bits (328), Expect = 1e-32
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 124 bits (298), Expect = 4e-29
Identities = 54/62 (87%), Positives = 60/62 (96%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
M D+++AALV+DNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 122 bits (294), Expect = 1e-28
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
D++VAALV+DNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ+K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 64.1 bits (149), Expect = 5e-11
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 347
SKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 67.3 bits (157), Expect = 5e-12
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +3
Query: 252 SSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPDEHPVLLTEAALNPKANRE 428
S R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE LNP NRE
Sbjct: 62 SQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Query: 429 KMTHI 443
KM +
Sbjct: 122 KMIEV 126
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +1
Query: 94 AALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRP--RHQGVMVGMGHKDSYVGDEA 252
+ +V DNG+G K G++G + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 60.9 bits (141), Expect = 5e-10
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQ 201
+V+DNGSG CKAG S D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 50.0 bits (114), Expect = 9e-07
Identities = 22/39 (56%), Positives = 29/39 (74%)
Frame = +3
Query: 327 KIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKMTHI 443
K+W H F ++LRV ++ PVLLTEA LNPK NRE+M +
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQL 2167
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 58.4 bits (135), Expect = 2e-09
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQ 201
E LV+D GS M K GF+GDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.6 bits (118), Expect = 3e-07
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +1
Query: 70 FKMCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVG--MGHKD-SYV 240
FK+ A+V+DNG G+ K GF+GD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 241 GDEAQAK 261
GD A AK
Sbjct: 753 GDAAVAK 759
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.8 bits (106), Expect = 8e-06
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 279 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAAL 407
K+PI H IV +WD ME+ W + LR P++H LL AL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLLAVLAL 341
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKMTHI 443
PI+ G++ +WD EKI + + ++ HP+L++EAA N + REK+T +
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTEL 55
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 375 EHPVLLTEAALNPKANREKMTHI 443
+HPVLLTEA LNP+ NREK +
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEV 148
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.3 bits (75), Expect = 0.046
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 198 MAGPSHDRGKHCARSIIS*EAGLAHTGAIVYYQRGNFFV 82
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 32.7 bits (71), Expect = 0.14
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 276 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPD--EHPVLLTEAALNPKANRE 428
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 31.1 bits (67), Expect = 0.43
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNE-LRVAPDE 377
P + G + NWD ++IW +TF E L A DE
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKEGLEDAMDE 323
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 88 EVAALVVDNGSGMCKAGFSGDDAPRAV 168
++A LV+D G+ K GF+ + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 173 GNTARGASSPEKPALHIPEPLSTT 102
GNT R P KPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 173 GNTARGASSPEKPALHIPEPLSTT 102
GNT R P KPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 173 GNTARGASSPEKPALHIPEPLSTT 102
GNT R P KP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 250 PHLLHKSPYVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 80
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06)
Length = 1826
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 331 IFSMSSQLVTIPCSMGYLRVRIPLLLEPHLL 239
+F++ S + PC + Y + IP++L PH L
Sbjct: 1630 LFAVISPINRCPCGVLYPSIGIPVVLNPHKL 1660
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 27.9 bits (59), Expect = 4.0
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 198 SGRDGRYGT*GLLCRR*GSSKRGILTLKYPIEHGIVTNW--DDMEKIWHHTFYN 353
+GR+ G+ +CR+ K ++TL + I G+ + D EK+W+HT N
Sbjct: 451 TGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYHTCPN 500
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 27.5 bits (58), Expect = 5.3
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = -2
Query: 325 SMSSQLVTIPCSMGYLRVRIPLLLEPHLLHKSPYVPYRPSRPDGGAFPRSRETLREEHHL 146
+++SQ VT M R +PL+ P + KSP+V + P PD + R E HH
Sbjct: 792 ALTSQQVTSSHDMP--RTSMPLVSYPPHMKKSPFVVHHP--PDSAS--RHGNQAPEAHH- 844
Query: 145 LRSRPCTYRS 116
P +Y+S
Sbjct: 845 --HEPGSYKS 852
>SB_56634| Best HMM Match : Pox_A32 (HMM E-Value=0.011)
Length = 684
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -2
Query: 316 SQLVTIPCSMGYLRVRIPLLLEPHLLHKSPYVPYRPSRPDGGAFPRSRETLREE 155
S+ T+P + L + PH ++ + R + PD G +P S++T R E
Sbjct: 497 SRKATLPGRLARLLGSLGRRWRPHSRPRTAFRRQRFALPDLGCYPWSKQTFRHE 550
>SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)
Length = 1225
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 193 GAFPRSRETLREEHHLLRSRPCTYRS 116
G +P S++T R E + +RPCT S
Sbjct: 832 GCYPWSKQTFRHEGPPISARPCTAMS 857
>SB_24944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3
Query: 234 RVLMSHTDHHALMAGPSHDRGKHCARSIIS*EAGLAHTGAIVYY 103
R++ S T H + G H G H ++ EAGL I+ +
Sbjct: 37 RLVFSATIEHEYLGGRYHSIGAHISQETSRHEAGLTQISRIIRF 80
>SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -1
Query: 188 LPTIEGNTARGASSPEKPALHIPEPLSTTNAATSSSHI 75
L T++ S P+ LHIP PL T T SHI
Sbjct: 554 LGTLQQTVGSTGSLPDLTNLHIPSPLQTP-IDTEDSHI 590
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +1
Query: 73 KMCDEEVAALVVDNG-SGMCKAGFSGD 150
++CD++ + +N MCKAG++GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 188 LPTIEGNTARGASSPEKPALHIPEPLSTTNAATSSSH 78
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_18108| Best HMM Match : HA (HMM E-Value=0.059)
Length = 282
Score = 26.6 bits (56), Expect = 9.2
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 224 IRTLM*EMRLKQKRYPDPQIPHRTRNRN 307
IRTL RL +KR PDP+ R RN N
Sbjct: 33 IRTLA---RLLEKRSPDPRTMPRKRNNN 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,271,921
Number of Sequences: 59808
Number of extensions: 308310
Number of successful extensions: 845
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 871599479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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