Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0425
(443 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 136 9e-33
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 136 9e-33
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 136 9e-33
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 136 9e-33
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 136 9e-33
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 136 9e-33
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 136 9e-33
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 136 9e-33
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 136 9e-33
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 136 9e-33
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 134 3e-32
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 129 8e-31
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 129 8e-31
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 128 2e-30
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 128 2e-30
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 87 4e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 71 3e-13
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 64 6e-11
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 53 8e-08
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 34 0.040
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 34 0.040
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 31 0.50
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 29 1.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 23 2.4
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 27 4.6
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 27 4.6
Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical pr... 27 6.1
U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 8.1
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 136 bits (328), Expect = 9e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 129 bits (312), Expect = 8e-31
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 136 bits (328), Expect = 9e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 128 bits (309), Expect = 2e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD++VAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 136 bits (328), Expect = 9e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 129 bits (312), Expect = 8e-31
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 136 bits (328), Expect = 9e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 129 bits (312), Expect = 8e-31
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 136 bits (328), Expect = 9e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 129 bits (312), Expect = 8e-31
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 136 bits (328), Expect = 9e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 126 bits (305), Expect = 5e-30
Identities = 55/62 (88%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD++VAAL++DNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 136 bits (328), Expect = 9e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 129 bits (312), Expect = 8e-31
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 136 bits (328), Expect = 9e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 17 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 76
Query: 435 THI 443
T I
Sbjct: 77 TQI 79
Score = 37.9 bits (84), Expect = 0.003
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1
Query: 208 MVGMGHKDSYVGDEAQAK 261
MVGMG KDSYVGDEAQ+K
Sbjct: 1 MVGMGQKDSYVGDEAQSK 18
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 136 bits (328), Expect = 9e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 47 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 106
Query: 435 THI 443
T I
Sbjct: 107 TQI 109
Score = 91.1 bits (216), Expect = 3e-19
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +1
Query: 130 KAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
+AGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ+K
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 48
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 136 bits (328), Expect = 9e-33
Identities = 60/63 (95%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 435 THI 443
T I
Sbjct: 121 TQI 123
Score = 129 bits (312), Expect = 8e-31
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 134 bits (324), Expect = 3e-32
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+AP+EHPVLLTEA LNPK+NREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKM 119
Query: 435 THI 443
T I
Sbjct: 120 TQI 122
Score = 123 bits (296), Expect = 7e-29
Identities = 55/60 (91%), Positives = 59/60 (98%)
Frame = +1
Query: 82 DEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
+EE+AALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ+K
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 129 bits (312), Expect = 8e-31
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 60.5 bits (140), Expect = 5e-10
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKI 332
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 129 bits (312), Expect = 8e-31
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD+EVAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 60.5 bits (140), Expect = 5e-10
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKI 332
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 128 bits (309), Expect = 2e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD++VAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 60.5 bits (140), Expect = 5e-10
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKI 332
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 128 bits (309), Expect = 2e-30
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQ 255
MCD++VAALVVDNGSGMCKAGF+GDDAPRAVFPSIVGRPRHQGVMVGMG KDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 256 AK 261
+K
Sbjct: 61 SK 62
Score = 54.8 bits (126), Expect = 3e-08
Identities = 23/23 (100%), Positives = 23/23 (100%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDM 323
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 87.4 bits (207), Expect = 4e-18
Identities = 36/64 (56%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPDEHPVLLTEAALNPKANREK 431
S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ P+EHPVLLT+A LNP NRE+
Sbjct: 63 SNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRER 122
Query: 432 MTHI 443
I
Sbjct: 123 SAEI 126
Score = 56.0 bits (129), Expect = 1e-08
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQA 258
+V+DNGSG+ KAGF+G+ P+ F + VGRP++ VM G D ++G +A++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 71.3 bits (167), Expect = 3e-13
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +3
Query: 252 SSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPDEHPVLLTEAALNPKANRE 428
S R +L + YP+++GIV NWDDM +W HTF E L + P E +LLTE LNP +NRE
Sbjct: 62 SQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNRE 121
Query: 429 KMTHI 443
KM +
Sbjct: 122 KMFQV 126
Score = 46.0 bits (104), Expect = 1e-05
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFSGDDAPRAVFPSIVGRP--RHQGVMVGMGHKDSYVGDE 249
+VVDNG+G K G++G + P +FPS+VGRP R + + KD VG+E
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEE 60
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 63.7 bits (148), Expect = 6e-11
Identities = 28/57 (49%), Positives = 34/57 (59%)
Frame = +3
Query: 273 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKMTHI 443
T+KYPI HGIV +WD ME+ W + LR P++H LLTE LN NRE I
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEI 136
Score = 35.5 bits (78), Expect = 0.017
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 76 MCDEEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIV 183
M ++ A V+DNG+G K G++G+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 53.2 bits (122), Expect = 8e-08
Identities = 22/52 (42%), Positives = 35/52 (67%)
Frame = +3
Query: 288 IEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKMTHI 443
++ G++ +W+ EKI H++ N L P EHPVL +E++ N +A REK+T I
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEI 145
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.040
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTF 347
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 91 VAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDE 249
+ ++ DNG K G ++PR V P+ + + +H+ V + H+ D+
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLV-PNSIVKAKHEKKRVFVAHEQEECSDK 54
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.3 bits (75), Expect = 0.040
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTF 347
PIE G V NWD ++IW TF
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF 82
Score = 27.9 bits (59), Expect = 3.5
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +1
Query: 91 VAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDE 249
+ ++ DNG K G ++PR V P+ + + +H+ V + H+ D+
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLV-PNSIVKAKHEKKRVFVAHEQEECSDK 54
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 30.7 bits (66), Expect = 0.50
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 230 SLCPIPTITP*WRGLPTIEGNTARGASSPEKPALHIPEPL 111
S P T TP RG P I + ++ PE P P+PL
Sbjct: 333 SQSPPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = -2
Query: 337 CQIFSMSSQLVTIPC-SMGYLRVRIPLLLEPHLLHKSPYVP-YRPSRPD 197
CQ+FS QLVT+ SMG +++++ + P L KS P P+ P+
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPE 299
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 390 AGRGVHRGRHAAH 352
AG G H G H AH
Sbjct: 618 AGYGAHHGHHGAH 630
Score = 23.4 bits (48), Expect(2) = 2.4
Identities = 8/20 (40%), Positives = 9/20 (45%)
Frame = -3
Query: 375 HRGRHAAHCRRYDAKSSPCH 316
H G H H + A SP H
Sbjct: 666 HHGHHGGHGTHHGAHHSPAH 685
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 130 KAGFSGDDAPRAVFPSIVGRPRHQG 204
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 27.5 bits (58), Expect = 4.6
Identities = 20/61 (32%), Positives = 32/61 (52%)
Frame = -1
Query: 266 TSFA*ASSPT*ESLCPIPTITP*WRGLPTIEGNTARGASSPEKPALHIPEPLSTTNAATS 87
T++A A S T + P PT P G PT A+SP+ + +P+S++ ++TS
Sbjct: 232 TAYA-APSSTASTSTPAPTNLPTTTGAPTNSTTNPPTATSPKTSS----QPVSSSTSSTS 286
Query: 86 S 84
S
Sbjct: 287 S 287
>Z93379-3|CAB07590.1| 282|Caenorhabditis elegans Hypothetical
protein F21H7.4 protein.
Length = 282
Score = 27.1 bits (57), Expect = 6.1
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 250 PHLLHKSPYVPYRPSRP 200
PH H+ P+ P+RP RP
Sbjct: 80 PHRPHRPPHRPHRPPRP 96
>U88171-1|AAB42251.2| 630|Caenorhabditis elegans Hypothetical
protein F25F8.1 protein.
Length = 630
Score = 27.1 bits (57), Expect = 6.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -3
Query: 387 GRGVHRGRHAAHCRRYDAKSSPCHPS*LRFRVRWGI*G-SGYLFCLS 250
GR +H A++CR+ + + P P R RW G G+LF S
Sbjct: 394 GRSIHVFDVASNCRKVEVIACPRDPKIEMSRTRWITVGPRGHLFMTS 440
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 282 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPDEHP 383
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 282 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPDEHP 383
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,223,847
Number of Sequences: 27780
Number of extensions: 214169
Number of successful extensions: 710
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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