Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0425
         (443 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   0.65 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   0.86 
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    23   2.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   2.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   2.6  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 0.65
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 357  LRVAPDEHPVLLTEAALNPKANREKMTHI 443
            LR+ P  H V+ T   +NP  + EK+ HI
Sbjct: 1461 LRLGPCWHAVMTTYPRINPDNHNEKL-HI 1488


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 0.86
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 268 IPLLLEPHLLHKSPYVPYRPSRP 200
           +P    PH  H S Y P+R S P
Sbjct: 312 LPPSYHPHQHHPSQYHPHRGSSP 334


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 121 GMCKAGFSGD 150
           GMCK G SGD
Sbjct: 130 GMCKEGISGD 139


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 175 SIVGRPRHQGVMVGMGHKDSYV 240
           SIVG P H    +  GH DS V
Sbjct: 753 SIVGTPVHMAPELLSGHYDSSV 774


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 175 SIVGRPRHQGVMVGMGHKDSYV 240
           SIVG P H    +  GH DS V
Sbjct: 791 SIVGTPVHMAPELLSGHYDSSV 812


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,440
Number of Sequences: 438
Number of extensions: 2579
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)