Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0425
(443 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 134 3e-32
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 134 3e-32
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 134 3e-32
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 134 3e-32
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 133 4e-32
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 133 4e-32
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 133 4e-32
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 133 4e-32
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 133 4e-32
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 124 2e-29
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 119 1e-27
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 118 2e-27
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 81 3e-16
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 62 2e-10
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 60 9e-10
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 59 1e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 42 2e-04
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 41 3e-04
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 38 0.003
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 0.82
At5g62330.1 68418.m07824 expressed protein 29 1.4
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 3.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 3.3
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 5.7
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.5
At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutam... 26 10.0
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 134 bits (324), Expect = 3e-32
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 THI 443
T I
Sbjct: 122 TQI 124
Score = 106 bits (254), Expect = 8e-24
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
E++ LV DNG+GM KAGF+GDDAPRAVFPSIVGRPRH GVMVGMG KD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 134 bits (324), Expect = 3e-32
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 THI 443
T I
Sbjct: 122 TQI 124
Score = 106 bits (254), Expect = 8e-24
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
E++ LV DNG+GM KAGF+GDDAPRAVFPSIVGRPRH GVMVGMG KD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 134 bits (323), Expect = 3e-32
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 THI 443
T I
Sbjct: 122 TQI 124
Score = 106 bits (254), Expect = 8e-24
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
E++ LV DNG+GM KAGF+GDDAPRAVFPSIVGRPRH GVMVGMG KD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 134 bits (323), Expect = 3e-32
Identities = 59/63 (93%), Positives = 60/63 (95%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAP+EHPVLLTEA LNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 THI 443
T I
Sbjct: 122 TQI 124
Score = 106 bits (254), Expect = 8e-24
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
E++ LV DNG+GM KAGF+GDDAPRAVFPSIVGRPRH GVMVGMG KD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 133 bits (322), Expect = 4e-32
Identities = 58/63 (92%), Positives = 60/63 (95%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAP+EHP+LLTEA LNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 435 THI 443
T I
Sbjct: 122 TQI 124
Score = 106 bits (254), Expect = 8e-24
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
E++ LV DNG+GM KAGF+GDDAPRAVFPSIVGRPRH GVMVGMG KD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 133 bits (322), Expect = 4e-32
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+AP+EHPVLLTEA LNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 THI 443
T I
Sbjct: 122 TQI 124
Score = 101 bits (243), Expect = 2e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
+++ +V DNG+GM KAGF+GDDAPRAVFPS+VGRPRH GVMVGM KD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 133 bits (322), Expect = 4e-32
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+AP+EHPVLLTEA LNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 THI 443
T I
Sbjct: 122 TQI 124
Score = 101 bits (243), Expect = 2e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
+++ +V DNG+GM KAGF+GDDAPRAVFPS+VGRPRH GVMVGM KD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 133 bits (322), Expect = 4e-32
Identities = 58/63 (92%), Positives = 60/63 (95%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAP+EHP+LLTEA LNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 435 THI 443
T I
Sbjct: 122 TQI 124
Score = 106 bits (254), Expect = 8e-24
Identities = 47/59 (79%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
E++ LV DNG+GM KAGF+GDDAPRAVFPSIVGRPRH GVMVGMG KD+YVGDEAQ+K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 133 bits (322), Expect = 4e-32
Identities = 57/63 (90%), Positives = 61/63 (96%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+AP+EHPVLLTEA LNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 435 THI 443
T I
Sbjct: 122 TQI 124
Score = 101 bits (243), Expect = 2e-22
Identities = 43/59 (72%), Positives = 52/59 (88%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
+++ +V DNG+GM KAGF+GDDAPRAVFPS+VGRPRH GVMVGM KD+YVGDEAQ+K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 124 bits (300), Expect = 2e-29
Identities = 51/63 (80%), Positives = 59/63 (93%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ P+EHP+LLTEA LNPK NREKM
Sbjct: 63 ARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKM 122
Query: 435 THI 443
T I
Sbjct: 123 TQI 125
Score = 101 bits (243), Expect = 2e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQAK 261
+E A+V DNG+GM KAGF+GDDAPRAVFPS+VGRPRH+GVMVGM KD++VGDEAQA+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 119 bits (286), Expect = 1e-27
Identities = 50/63 (79%), Positives = 59/63 (93%)
Frame = +3
Query: 255 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREKM 434
++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAP+EHPVLLTEA LNPKA+REKM
Sbjct: 17 ARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKM 76
Query: 435 THI 443
T I
Sbjct: 77 TQI 79
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 208 MVGMGHKDSYVGDEAQAK 261
MVGM D +VGD+A+A+
Sbjct: 1 MVGMNENDLFVGDDAEAR 18
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 118 bits (283), Expect = 2e-27
Identities = 52/65 (80%), Positives = 56/65 (86%)
Frame = +3
Query: 249 GSSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANRE 428
G + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV P+EHPVLLTEA NPKANRE
Sbjct: 49 GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANRE 108
Query: 429 KMTHI 443
KMT I
Sbjct: 109 KMTQI 113
Score = 59.3 bits (137), Expect = 1e-09
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGDEAQA 258
+V D G GM +AGF+GD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 81.0 bits (191), Expect = 3e-16
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +3
Query: 252 SSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREK 431
S R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ LNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 432 M 434
M
Sbjct: 120 M 120
Score = 47.6 bits (108), Expect = 4e-06
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFSGDDAPRAVFPSIVGRP--RHQGVMVGMGHKDSYVGD 246
+V DNG+G K GF+G++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 61.7 bits (143), Expect = 2e-10
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +3
Query: 276 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANRE 428
L YPIEHG V +WD ME+ W +N LR P++H LLTE+ L P +RE
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESRE 136
Score = 34.7 bits (76), Expect = 0.028
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 97 ALVVDNGSGMCKAGFSGDDAPRAVFPSIV 183
A+V+DNG+G K GF+G+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 59.7 bits (138), Expect = 9e-10
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +3
Query: 258 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREK 431
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E LN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 56.0 bits (129), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVG 186
+EV+A+VVD GS CKAG++G+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 59.3 bits (137), Expect = 1e-09
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = +3
Query: 252 SSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALNPKANREK 431
S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E LN + REK
Sbjct: 83 SYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREK 142
Query: 432 MTHI 443
+
Sbjct: 143 AAEL 146
Score = 55.6 bits (128), Expect = 1e-08
Identities = 22/34 (64%), Positives = 31/34 (91%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVG 186
+EV+A+VVD GS CKAG++G+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 41.9 bits (94), Expect = 2e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVMVGMGHKDSYVGD 246
+V+DNG+ + G++G+ PR VF +IV RPRH+ G + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 33.5 bits (73), Expect = 0.066
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPDEHPVLLTEAALNPKANREKMTHI 443
P + +V ++ ME I + F + +HP+L+TE A NP +R KM +
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAEL 138
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 41.1 bits (92), Expect = 3e-04
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 276 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPDEHPVLLTEAALN-PKANR 425
++ PI+ G + N D +IW H F + L +AP +LLTEA L+ P R
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQR 111
Score = 32.7 bits (71), Expect = 0.11
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 100 LVVDNGSGMCKAGFSGDDAPRAVFPSIVGRP 192
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 285 PIEHGIVTNWDDMEKIWHHTFYNELR-VAPDEHPVLLTEAALNPKANREKMTHI 443
PIE G++ +WD ME + + Y L +E +L T+ PKA RE++ +
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQL 110
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 97 ALVVDNGSGMCKAGFS-GDDAPRAVFPSIVGR 189
ALVVD GS KAG + D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 25.8 bits (54), Expect(2) = 0.82
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 197 WRGLPTIEGNTARGASSPEKPA--LHIPEPL 111
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 22.6 bits (46), Expect(2) = 0.82
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 386 DGVFIGGDTQLIVEGMMPNLLHVIPVS 306
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At5g62330.1 68418.m07824 expressed protein
Length = 170
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -2
Query: 268 IPLLLEPHLLHKSPYVPYRPSRPDGGAFPRSRET--LREEHHLLRSRPCTYRSHCLLPT 98
+P+ + H L Y P +PS P G ++ R ET + E HL + C LPT
Sbjct: 45 VPIPVRGHALGLRKYDPNKPSTPRGCSYRRESETSAVHEALHLTPEEE-PVPNPCRLPT 102
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 371
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +3
Query: 270 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 371
L++KY + H I + W + +IW L+ P
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 85 EEVAALVVDNGSGMCKAGFSGDDAPRAVFPSIVGRPRHQGVM 210
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 197 WRGLPTIEGNTARGASSPEKPALHIPEPLSTTNAATSSSHI 75
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g16570.1 68415.m01900 amidophosphoribosyltransferase / glutamine
phosphoribosylpyrophosphate amidotransferase /
phosphoribosyldiphosphate 5-amidotransferase identical
to amidophosphoribosyltransferase [Arabidopsis thaliana]
GI:469193; identical to cDNA
amidophosphoribosyltransferase GI:469192
Length = 566
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 328 FSMSSQLVTIPCSMGYLRVRIPLLLEPHLLHKSPYVPYRPS 206
FS S L+T P + Y +PL +P L K P++ PS
Sbjct: 7 FSSSLSLITKPNNSSYTNQPLPLFPKPFL--KPPHLSLLPS 45
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,849,309
Number of Sequences: 28952
Number of extensions: 209404
Number of successful extensions: 588
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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