Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0424
         (727 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5FK91 Cluster: Putative uncharacterized protein precur...    42   0.016
UniRef50_Q8IKF6 Cluster: Putative uncharacterized protein; n=1; ...    37   0.44 
UniRef50_Q54LY7 Cluster: G-protein-coupled receptor (GPCR) famil...    37   0.58 
UniRef50_Q8IEH8 Cluster: Putative uncharacterized protein PF13_0...    36   1.3  
UniRef50_Q64238 Cluster: Orf2 5' of EpoR protein; n=1; Mus sp.|R...    33   5.4  
UniRef50_Q7N1G9 Cluster: Similar to ccm gene codes for both Ccm1...    33   5.4  
UniRef50_Q54L84 Cluster: Putative uncharacterized protein; n=1; ...    33   9.5  
UniRef50_A2FFS2 Cluster: Ankyrin repeat protein, putative; n=5; ...    33   9.5  

>UniRef50_A5FK91 Cluster: Putative uncharacterized protein
           precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
           Putative uncharacterized protein precursor -
           Flavobacterium johnsoniae UW101
          Length = 359

 Score = 41.9 bits (94), Expect = 0.016
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
 Frame = +3

Query: 237 IVLSIVINEYLHN-NMFGCLYQFILMFIV-YICNYISVQICMY--WFMVFL*RCDVVVFL 404
           + +++VIN ++ + N+F  LY FIL++++ Y+  Y+   +  +  WF+ FL      VF 
Sbjct: 148 LFVTLVINYFIESKNLFKSLYLFILIWLISYLNIYLKFTVSSHTVWFIAFL-----FVFT 202

Query: 405 VGLSLFMTHECIDSG**VKKEIKFTCAVIIEFYCRNVIDI 524
           +G  +F+ +E I S   +K   K T  +I+ +   NV  I
Sbjct: 203 LGRIMFLYNEKISSWRILKDPKKLTFLMILFYIISNVESI 242


>UniRef50_Q8IKF6 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2558

 Score = 37.1 bits (82), Expect = 0.44
 Identities = 21/79 (26%), Positives = 33/79 (41%)
 Frame = -2

Query: 252  RLIELSNGMMHKYIEWSYKAISAELFF*YFMYTYHKYYRSGFICKDDYNNKDHQMEIYCF 73
            RL+ L +G+ + Y +   K +S +  F YF      Y   G +C D+Y     Q  + CF
Sbjct: 1144 RLMILCSGITYVYKDNKQKIVSTDEVFVYFFSQKKWYLLKGKLCNDEYLYNGRQRHVGCF 1203

Query: 72   ITIRFYLSFLANNSLSTTF 16
               +  L     N +   F
Sbjct: 1204 FESKNVLGRANRNPVPCVF 1222


>UniRef50_Q54LY7 Cluster: G-protein-coupled receptor (GPCR) family
           protein; n=1; Dictyostelium discoideum AX4|Rep:
           G-protein-coupled receptor (GPCR) family protein -
           Dictyostelium discoideum AX4
          Length = 330

 Score = 36.7 bits (81), Expect = 0.58
 Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 4/105 (3%)
 Frame = -1

Query: 493 IMTAHVNFISFLT--YYPESMHS*VINNDKPTKNTTTSHLYRNTINQYIHICTLI*LHIY 320
           IMT  ++   F T  Y     ++  INN +  KNT + +   N  N YI I   I   I+
Sbjct: 226 IMTLVLSIYQFSTESYGSGGAYANSINNKRNDKNTESGNSNNNN-NSYIEILLYISKAIF 284

Query: 319 TINIKINW--YKQPNILLCRYSLITIDRTIQWNDAQVY*MVLQGY 191
            +    N   Y + + L  RY  ITI R I W D   Y  +  G+
Sbjct: 285 LLQGFFNALVYLRSSKLRDRYKKITIFRKIFWRDEADYQSINDGF 329


>UniRef50_Q8IEH8 Cluster: Putative uncharacterized protein PF13_0078;
            n=3; Plasmodium|Rep: Putative uncharacterized protein
            PF13_0078 - Plasmodium falciparum (isolate 3D7)
          Length = 1737

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 19/62 (30%), Positives = 34/62 (54%)
 Frame = -1

Query: 487  TAHVNFISFLTYYPESMHS*VINNDKPTKNTTTSHLYRNTINQYIHICTLI*LHIYTINI 308
            T + N+IS + Y+P++ +S    N+K TK   +  L+      Y+  C +I L I+ ++I
Sbjct: 1279 TLNNNYISNMNYHPDNFYSNANINNKTTKYNLSLLLHLKIYLTYLFECDIIKLFIFILHI 1338

Query: 307  KI 302
             I
Sbjct: 1339 LI 1340


>UniRef50_Q64238 Cluster: Orf2 5' of EpoR protein; n=1; Mus sp.|Rep:
           Orf2 5' of EpoR protein - Mus sp
          Length = 85

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 12/41 (29%), Positives = 26/41 (63%)
 Frame = +3

Query: 255 INEYLHNNMFGCLYQFILMFIVYICNYISVQICMYWFMVFL 377
           +N+Y +  +  C+Y ++ +F+ Y+C + S  +CMY   ++L
Sbjct: 29  VNQYTYLYLCICVYPYMCLFM-YVCIHASTHVCMYVRTMYL 68


>UniRef50_Q7N1G9 Cluster: Similar to ccm gene codes for both Ccm1
           and Ccm2 proteins of Proteus mirabilis; n=1;
           Photorhabdus luminescens subsp. laumondii|Rep: Similar
           to ccm gene codes for both Ccm1 and Ccm2 proteins of
           Proteus mirabilis - Photorhabdus luminescens subsp.
           laumondii
          Length = 219

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +3

Query: 234 WIVLSIVINEYLHNNMFGCLYQFILMFIVYICNYISVQ 347
           WI+ SI +  YL  N FGC    IL F+  I  +I ++
Sbjct: 16  WIMWSIALGFYLAGNFFGCAVTAILSFLALIFFFIHMR 53


>UniRef50_Q54L84 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 533

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 478 HVPSLLSFIVGT*LILTFLGEFIQTINRHKYLLN 579
           H PSL  +++    I+ +  EFI T+N  KY ++
Sbjct: 456 HTPSLFEYVMANKRIIKYKSEFIDTLNNSKYYID 489


>UniRef50_A2FFS2 Cluster: Ankyrin repeat protein, putative; n=5;
           Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
           putative - Trichomonas vaginalis G3
          Length = 805

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -1

Query: 427 VINNDKPTKNTTTSHLYRNTINQYIHICTLI*LHIYTINIKINWYKQPNI-LLCRYSLIT 251
           ++++    KNT T  LY  TIN +  I  L   +   +N K   YK+  + + C  + I 
Sbjct: 564 IVSDTNADKNTMTELLYNATINDHTDIAKLTVSNGADVNHKFFGYKKTALHIACEINNIE 623

Query: 250 IDRTIQWNDAQV 215
           +   + W  A +
Sbjct: 624 LAEFLIWRGADI 635


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 692,272,648
Number of Sequences: 1657284
Number of extensions: 14328100
Number of successful extensions: 28484
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28410
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 59090914597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)