Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0424
(727 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 27 0.12
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 26 0.27
AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical pro... 23 1.9
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 23 3.3
AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory recept... 23 3.3
AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory recept... 23 3.3
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 22 4.4
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 22 4.4
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 22 4.4
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 21 7.7
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 27.5 bits (58), Expect = 0.12
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 288 CLYQFILMFIVYICNYISVQICMYWFMV--FL*RCDVVVFLVGLSLFMTH 431
C+Y F FI++ + + + +C+Y+F+V F C + F +F H
Sbjct: 112 CVYYFYYAFIIFTVHLLFL-LCIYYFVVPLFFLLC-IYYFYCAFIIFTVH 159
Score = 23.4 bits (48), Expect = 1.9
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 288 CLYQFILMFIVYICNYISVQICMYWFMVFL*RCDVVVFLVGL 413
C+Y F FI++ + + + +C+Y F C ++F + L
Sbjct: 145 CIYYFYCAFIIFTVHLLFL-LCIYHFF-----CAFIIFTMHL 180
Score = 23.0 bits (47), Expect = 2.5
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Frame = +3
Query: 228 FHWIVLSIVINEY--LHNNMFGCLYQFILMFIVYICN-----YISVQICMYWF 365
F+ +L ++ +Y LH C+Y F FI++ + + + +C+Y+F
Sbjct: 189 FNMHLLFLLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYF 241
Score = 21.8 bits (44), Expect = 5.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 288 CLYQFILMFIVYICNY 335
C Y F FI+ +C Y
Sbjct: 99 CTYYFYYAFIILLCVY 114
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 26.2 bits (55), Expect = 0.27
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
Frame = +3
Query: 216 TCASFHWIVL--SIVINEYLH--NNMFGCLYQFILMF-IVYICNYISVQICMY 359
TC F I+L S +N LH N + CLY++I+++ + + + +Q C +
Sbjct: 135 TCELFFVILLWISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQVMLIQFCAF 187
>AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical
protein protein.
Length = 86
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 140 IGQDLFV-KMITTIKIIRWKFIVLSPLGFI 54
+ LFV I I + RW I LS LGF+
Sbjct: 3 VDMQLFVLSPIILIPLFRWPKIGLSALGFL 32
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 22.6 bits (46), Expect = 3.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 155 PITNIIGQDLFVKMITTIKIIRW 87
P+T+I Q+L +K T +I+W
Sbjct: 162 PVTHIFLQNLILKENTYDAVIKW 184
>AM292370-1|CAL23182.1| 418|Tribolium castaneum gustatory receptor
candidate 49 protein.
Length = 418
Score = 22.6 bits (46), Expect = 3.3
Identities = 6/23 (26%), Positives = 12/23 (52%)
Frame = +3
Query: 309 MFIVYICNYISVQICMYWFMVFL 377
+ ++Y N + C YW +V +
Sbjct: 313 LVVIYTFNLFYLCFCFYWLLVMV 335
>AM292335-1|CAL23147.2| 374|Tribolium castaneum gustatory receptor
candidate 14 protein.
Length = 374
Score = 22.6 bits (46), Expect = 3.3
Identities = 6/23 (26%), Positives = 12/23 (52%)
Frame = +3
Query: 309 MFIVYICNYISVQICMYWFMVFL 377
+ ++Y N + C YW +V +
Sbjct: 269 LVVIYTFNLFYLCFCFYWLLVMV 291
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 520 ILTFLGEFIQTINRHKYLLNK 582
I TFL +Q+I R LLN+
Sbjct: 577 IFTFLMSLLQSIKRRYVLLNE 597
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 499 NSIMTAHVNFISFLTYYPESMHS*VINND 413
+S M H F + +PE +HS +++ND
Sbjct: 53 HSHMPPHSVFAANNAEFPEFVHSGMVHND 81
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 22.2 bits (45), Expect = 4.4
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 499 NSIMTAHVNFISFLTYYPESMHS*VINND 413
+S M H F + +PE +HS +++ND
Sbjct: 53 HSHMPPHSVFAANNAEFPEFVHSGMVHND 81
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 21.4 bits (43), Expect = 7.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -2
Query: 675 TCYNLICSKQLGQILG*KSKIV*VYAAVH*WLI*KVFMSI 556
TC++ K GQI G K I Y V ++ K+ SI
Sbjct: 232 TCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQSI 271
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,004
Number of Sequences: 336
Number of extensions: 4604
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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