Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0424
         (727 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    31   4.2  
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    31   5.6  

>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +3

Query: 213 YTCAS---FHWIVLSIVINEYLHNNMFGCLYQFILMFI-VYICNYISVQICMYWFM 368
           YTC     F +  + I +  +++  +  C+Y +I M+  VYI  YI + +C+Y +M
Sbjct: 191 YTCIHRCIFIYTYVYICVYIHIYICIHVCVYSYIHMYTYVYIHVYIGIHMCVYSYM 246



 Score = 30.3 bits (65), Expect = 7.3
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
 Frame = +3

Query: 213 YTCASFHWIVLSIVINEY--LHN--NMFGCLYQFILMFI-VYICNYISVQICMY 359
           Y C   +  V  + I++Y  +H   +M+ C+++ I ++  VYIC YI + IC++
Sbjct: 165 YVCVHMYTCV-HMCIHKYTCMHMCIHMYTCIHRCIFIYTYVYICVYIHIYICIH 217


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = +3

Query: 234 WIVLSIVINEYLHNNMFGCLYQFILMFIVYICNYISVQICMYWFMVFL*RCDVVVFL 404
           +I + + I  Y++  +F  +Y +I ++I YIC YI + I +Y F        + ++L
Sbjct: 26  YIYVYVYIYLYIYFYIFTYIYLYIFIYI-YICLYIYLYIYLYIFTYIYIYLHIFIYL 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,875,305
Number of Sequences: 237096
Number of extensions: 2104985
Number of successful extensions: 10382
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10373
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)