Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0424
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128504-1|AAM75097.1| 1455|Drosophila melanogaster SD06922p pro...    30   3.7  
AE014298-2946|AAF49027.2| 1736|Drosophila melanogaster CG15618-P...    30   3.7  
AY665374-1|AAT76541.1|  172|Drosophila melanogaster CG16707 prot...    29   4.9  
BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p pro...    29   6.4  
AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-P...    29   6.4  

>AY128504-1|AAM75097.1| 1455|Drosophila melanogaster SD06922p protein.
          Length = 1455

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
 Frame = -2

Query: 345  VHLYNYIYIQ*TLK*IGINNQTYYYVGIH*LRLIELSNGMMHKYIE------WSYKAISA 184
            V+L N+  +Q   + +GI+N+ Y   G+H  RL  +S G++   +E      W+   +  
Sbjct: 1071 VYLLNHKEVQSRCQQLGISNRFYQIFGLHLHRLRGISQGIVLHIVEDLAETIWALDELKV 1130

Query: 183  ELFF*YFMYTYHKYYRSGFICKDDYNNKDHQMEI 82
            EL+  Y +       ++  + + D  + +   +I
Sbjct: 1131 ELWL-YILLQRSLSEQNSLVSEQDIEHFEFSRDI 1163


>AE014298-2946|AAF49027.2| 1736|Drosophila melanogaster CG15618-PA
            protein.
          Length = 1736

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
 Frame = -2

Query: 345  VHLYNYIYIQ*TLK*IGINNQTYYYVGIH*LRLIELSNGMMHKYIE------WSYKAISA 184
            V+L N+  +Q   + +GI+N+ Y   G+H  RL  +S G++   +E      W+   +  
Sbjct: 1352 VYLLNHKEVQSRCQQLGISNRFYQIFGLHLHRLRGISQGIVLHIVEDLAETIWALDELKV 1411

Query: 183  ELFF*YFMYTYHKYYRSGFICKDDYNNKDHQMEI 82
            EL+  Y +       ++  + + D  + +   +I
Sbjct: 1412 ELWL-YILLQRSLSEQNSLVSEQDIEHFEFSRDI 1444


>AY665374-1|AAT76541.1|  172|Drosophila melanogaster CG16707
           protein.
          Length = 172

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 16/69 (23%), Positives = 35/69 (50%)
 Frame = +3

Query: 219 CASFHWIVLSIVINEYLHNNMFGCLYQFILMFIVYICNYISVQICMYWFMVFL*RCDVVV 398
           C    +++L + +  +  N +  CL  F+ +F   +C  + + +C++  +     C+ V 
Sbjct: 75  CEEVTFLILCLFVGLFSANFLILCL--FVGLFSANLCEEVFLILCLFVGLFSANLCEEVT 132

Query: 399 FLVGLSLFM 425
           FL+ L LF+
Sbjct: 133 FLI-LCLFV 140


>BT021460-1|AAX33608.1| 1761|Drosophila melanogaster AT17561p protein.
          Length = 1761

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +3

Query: 342  VQICMYWFMVFL*RCDVVVFLVGLSLFMTHECIDSG**VKKEIKFTCAVIIEFYCRNVI 518
            V I M+   VF+ R   +V ++GLSL  +  C+ S    +K    +   I+  +C N+I
Sbjct: 1213 VVILMFGMPVFVDR-QQLVGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFCANLI 1270


>AE014298-3093|ABI30991.1| 1997|Drosophila melanogaster CG34120-PC,
            isoform C protein.
          Length = 1997

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 18/59 (30%), Positives = 30/59 (50%)
 Frame = +3

Query: 342  VQICMYWFMVFL*RCDVVVFLVGLSLFMTHECIDSG**VKKEIKFTCAVIIEFYCRNVI 518
            V I M+   VF+ R   +V ++GLSL  +  C+ S    +K    +   I+  +C N+I
Sbjct: 1449 VVILMFGMPVFVDR-QQLVGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFCANLI 1506


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,386,431
Number of Sequences: 53049
Number of extensions: 628304
Number of successful extensions: 1015
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)