Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0422
         (778 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    25   0.89 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   4.8  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   6.3  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.3  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 496 LAAHPLSPAGVIAKRPAPIALPNSCA 573
           L+  P  P GV  KR  P AL  +CA
Sbjct: 48  LSKGPCPPQGVDLKRVLPEALQTNCA 73


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 514 SPAGVIAKRPAPIALPNSCA 573
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 514 SPAGVIAKRPAPIALPNSCA 573
           +P+G   K+  P AL N CA
Sbjct: 52  TPSGEELKKDIPDALKNECA 71


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 356 IDLCVRCYPRGGARYPIR 409
           +DLCVR  P     YP R
Sbjct: 15  LDLCVRKRPHSPEPYPPR 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,631
Number of Sequences: 336
Number of extensions: 3455
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)