Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0422
         (778 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   111   8e-25
AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   111   8e-25
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   111   8e-25
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   111   8e-25
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   111   8e-25
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   111   8e-25
U87925-1|AAC47487.1|  448|Drosophila melanogaster D-cbl protein.       29   9.4  
AY118593-1|AAM49962.1|  448|Drosophila melanogaster LD46082p pro...    29   9.4  
AJ223175-1|CAA11149.1|  448|Drosophila melanogaster cbl protein.       29   9.4  
AE014296-1455|AAF50417.1|  448|Drosophila melanogaster CG7037-PA...    29   9.4  

>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  111 bits (268), Expect = 8e-25
 Identities = 54/82 (65%), Positives = 68/82 (82%)
 Frame = +1

Query: 7   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 186
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 187 PMPKLKAFQKIQIRLVRELEKK 252
           P+P+ K FQKIQI LVRELEKK
Sbjct: 63  PIPQQKVFQKIQIILVRELEKK 84



 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +3

Query: 246 KEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 386
           K+ SGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  111 bits (268), Expect = 8e-25
 Identities = 54/82 (65%), Positives = 68/82 (82%)
 Frame = +1

Query: 7   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 186
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 187 PMPKLKAFQKIQIRLVRELEKK 252
           P+P+ K FQKIQI LVRELEKK
Sbjct: 63  PIPQQKVFQKIQIILVRELEKK 84



 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +3

Query: 246 KEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 386
           K+ SGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  111 bits (268), Expect = 8e-25
 Identities = 54/82 (65%), Positives = 68/82 (82%)
 Frame = +1

Query: 7   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 186
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 187 PMPKLKAFQKIQIRLVRELEKK 252
           P+P+ K FQKIQI LVRELEKK
Sbjct: 63  PIPQQKVFQKIQIILVRELEKK 84



 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +3

Query: 246 KEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 386
           K+ SGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  111 bits (268), Expect = 8e-25
 Identities = 54/82 (65%), Positives = 68/82 (82%)
 Frame = +1

Query: 7   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 186
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 187 PMPKLKAFQKIQIRLVRELEKK 252
           P+P+ K FQKIQI LVRELEKK
Sbjct: 63  PIPQQKVFQKIQIILVRELEKK 84



 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +3

Query: 246 KEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 386
           K+ SGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  111 bits (268), Expect = 8e-25
 Identities = 54/82 (65%), Positives = 68/82 (82%)
 Frame = +1

Query: 7   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 186
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 187 PMPKLKAFQKIQIRLVRELEKK 252
           P+P+ K FQKIQI LVRELEKK
Sbjct: 63  PIPQQKVFQKIQIILVRELEKK 84



 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +3

Query: 246 KEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 386
           K+ SGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  111 bits (268), Expect = 8e-25
 Identities = 54/82 (65%), Positives = 68/82 (82%)
 Frame = +1

Query: 7   MSTKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV 186
           + +KIIK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 187 PMPKLKAFQKIQIRLVRELEKK 252
           P+P+ K FQKIQI LVRELEKK
Sbjct: 63  PIPQQKVFQKIQIILVRELEKK 84



 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +3

Query: 246 KEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILE 386
           K+ SGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILE
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILE 129


>U87925-1|AAC47487.1|  448|Drosophila melanogaster D-cbl protein.
          Length = 448

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/65 (26%), Positives = 25/65 (38%)
 Frame = +3

Query: 174 HHLCADA*TEGLSEDPDQACP*ARKEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 353
           H LC    T    +   Q CP  R E+ G   + V      P+  H   V N +++ +  
Sbjct: 386 HLLCTPCLTSWQVDSEGQGCPFCRAEIKGTEQIVVD--AFDPRKQHNRNVTNGRQQQQEE 443

Query: 354 TLTSV 368
             T V
Sbjct: 444 DDTEV 448


>AY118593-1|AAM49962.1|  448|Drosophila melanogaster LD46082p
           protein.
          Length = 448

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/65 (26%), Positives = 25/65 (38%)
 Frame = +3

Query: 174 HHLCADA*TEGLSEDPDQACP*ARKEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 353
           H LC    T    +   Q CP  R E+ G   + V      P+  H   V N +++ +  
Sbjct: 386 HLLCTPCLTSWQVDSEGQGCPFCRAEIKGTEQIVVD--AFDPRKQHNRNVTNGRQQQQEE 443

Query: 354 TLTSV 368
             T V
Sbjct: 444 DDTEV 448


>AJ223175-1|CAA11149.1|  448|Drosophila melanogaster cbl protein.
          Length = 448

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/65 (26%), Positives = 25/65 (38%)
 Frame = +3

Query: 174 HHLCADA*TEGLSEDPDQACP*ARKEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 353
           H LC    T    +   Q CP  R E+ G   + V      P+  H   V N +++ +  
Sbjct: 386 HLLCTPCLTSWQVDSEGQGCPFCRAEIKGTEQIVVD--AFDPRKQHNRNVTNGRQQQQEE 443

Query: 354 TLTSV 368
             T V
Sbjct: 444 DDTEV 448


>AE014296-1455|AAF50417.1|  448|Drosophila melanogaster CG7037-PA,
           isoform A protein.
          Length = 448

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 17/65 (26%), Positives = 25/65 (38%)
 Frame = +3

Query: 174 HHLCADA*TEGLSEDPDQACP*ARKEVSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 353
           H LC    T    +   Q CP  R E+ G   + V      P+  H   V N +++ +  
Sbjct: 386 HLLCTPCLTSWQVDSEGQGCPFCRAEIKGTEQIVVD--AFDPRKQHNRNVTNGRQQQQEE 443

Query: 354 TLTSV 368
             T V
Sbjct: 444 DDTEV 448


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,091,684
Number of Sequences: 53049
Number of extensions: 698084
Number of successful extensions: 1695
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1695
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)