Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0417
         (345 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   0.50 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    20   8.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   8.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   8.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    20   8.2  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 0.50
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 306 CDSYIILSIWLSCTMVLTC 250
           CD   IL  W+ C + L C
Sbjct: 317 CDIATILDFWVRCVLSLHC 335


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 123 LSEMKFFNETSYEPIPIYP 179
           L E+KF +    E + +YP
Sbjct: 342 LQELKFMDRVIKESLRLYP 360


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 151 LVMNQFLFIQLWIITGRSS 207
           +V   FLF QLW     SS
Sbjct: 270 IVRALFLFFQLWATVYTSS 288


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 151 LVMNQFLFIQLWIITGRSS 207
           +V   FLF QLW     SS
Sbjct: 266 IVRALFLFFQLWATVYTSS 284


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 19.8 bits (39), Expect = 8.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 123 LSEMKFFNETSYEPIPIYP 179
           L E+KF +    E + +YP
Sbjct: 342 LQELKFMDRVIKESLRLYP 360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,830
Number of Sequences: 336
Number of extensions: 1772
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)