Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0417
         (345 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        23   2.4  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   3.2  

>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 114 LLRQEIQAILPPPLCAVSGLVRVD 43
           LL + I+  +P P CA S L  +D
Sbjct: 82  LLHEHIKYDVPKPCCAPSSLDHID 105


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 67  RFGPRTGRQKPSSPY 23
           R+GP  GR  P +PY
Sbjct: 436 RYGPARGRAGPLAPY 450


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 375,965
Number of Sequences: 2352
Number of extensions: 7146
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)