Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0417
         (345 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051542-1|AAK92966.1|  439|Drosophila melanogaster GH19141p pro...    54   7e-08
AE014297-966|AAF54398.1|  439|Drosophila melanogaster CG8199-PA ...    54   7e-08
M57889-1|AAA28920.1| 1322|Drosophila melanogaster su(s) protein ...    30   0.93 
AY071563-1|AAL49185.1| 1220|Drosophila melanogaster RE63043p pro...    30   0.93 
AL031581-8|CAA20886.1| 1325|Drosophila melanogaster EG:115C2.3,F...    30   0.93 
AE014298-82|AAF45534.1| 1325|Drosophila melanogaster CG6222-PA p...    30   0.93 
AY121677-1|AAM52004.1|  507|Drosophila melanogaster RE27528p pro...    27   8.7  
AY052148-1|AAK93572.1|  373|Drosophila melanogaster SD10847p pro...    27   8.7  
AE014296-3359|AAN12130.1|  373|Drosophila melanogaster CG5274-PB...    27   8.7  
AE014296-3358|AAF51594.1|  373|Drosophila melanogaster CG5274-PA...    27   8.7  
AE014134-3342|AAF53963.1|  507|Drosophila melanogaster CG9253-PA...    27   8.7  

>AY051542-1|AAK92966.1|  439|Drosophila melanogaster GH19141p
           protein.
          Length = 439

 Score = 53.6 bits (123), Expect = 7e-08
 Identities = 22/52 (42%), Positives = 32/52 (61%)
 Frame = +3

Query: 99  FPGARAPYLSEMKFFNETSYEPIPIYPVMDNNGQIIDLNEEPNLDKATLINM 254
           FPGA+AP++S++       Y PIPIY VMD +G I D  ++P L +  +  M
Sbjct: 46  FPGAKAPFVSKLNLIQPEDYAPIPIYRVMDQDGYIADETQDPQLGREVVEKM 97



 Score = 50.4 bits (115), Expect = 6e-07
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = +2

Query: 257 KTMVQLSHMDKIIYESQRQGRISFYMTNY 343
           + MV L+ MDKI+YESQRQGRISFYMTN+
Sbjct: 99  RDMVLLNTMDKILYESQRQGRISFYMTNF 127


>AE014297-966|AAF54398.1|  439|Drosophila melanogaster CG8199-PA
           protein.
          Length = 439

 Score = 53.6 bits (123), Expect = 7e-08
 Identities = 22/52 (42%), Positives = 32/52 (61%)
 Frame = +3

Query: 99  FPGARAPYLSEMKFFNETSYEPIPIYPVMDNNGQIIDLNEEPNLDKATLINM 254
           FPGA+AP++S++       Y PIPIY VMD +G I D  ++P L +  +  M
Sbjct: 46  FPGAKAPFVSKLNLIQPEDYAPIPIYRVMDQDGYIADETQDPQLGREVVEKM 97



 Score = 50.4 bits (115), Expect = 6e-07
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = +2

Query: 257 KTMVQLSHMDKIIYESQRQGRISFYMTNY 343
           + MV L+ MDKI+YESQRQGRISFYMTN+
Sbjct: 99  RDMVLLNTMDKILYESQRQGRISFYMTNF 127


>M57889-1|AAA28920.1| 1322|Drosophila melanogaster su(s) protein
            protein.
          Length = 1322

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +3

Query: 114  APYLSEMKFF-NETSYEPI--PIYPVMDNNGQIIDLNEEPNLDKATL 245
            AP + ++ F  N T+ + I   ++  +D+NG+++ + EEPN + A L
Sbjct: 1102 APKIFDVSFIVNNTTLQQIFAKLFIFVDDNGEVVQIPEEPNGNGAAL 1148


>AY071563-1|AAL49185.1| 1220|Drosophila melanogaster RE63043p protein.
          Length = 1220

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +3

Query: 114  APYLSEMKFF-NETSYEPI--PIYPVMDNNGQIIDLNEEPNLDKATL 245
            AP + ++ F  N T+ + I   ++  +D+NG+++ + EEPN + A L
Sbjct: 1105 APKIFDVSFIVNNTTLQQIFAKLFIFVDDNGEVVQIPEEPNGNGAAL 1151


>AL031581-8|CAA20886.1| 1325|Drosophila melanogaster
            EG:115C2.3,FBgn0003575;su(s) protein.
          Length = 1325

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +3

Query: 114  APYLSEMKFF-NETSYEPI--PIYPVMDNNGQIIDLNEEPNLDKATL 245
            AP + ++ F  N T+ + I   ++  +D+NG+++ + EEPN + A L
Sbjct: 1105 APKIFDVSFIVNNTTLQQIFAKLFIFVDDNGEVVQIPEEPNGNGAAL 1151


>AE014298-82|AAF45534.1| 1325|Drosophila melanogaster CG6222-PA
            protein.
          Length = 1325

 Score = 29.9 bits (64), Expect = 0.93
 Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
 Frame = +3

Query: 114  APYLSEMKFF-NETSYEPI--PIYPVMDNNGQIIDLNEEPNLDKATL 245
            AP + ++ F  N T+ + I   ++  +D+NG+++ + EEPN + A L
Sbjct: 1105 APKIFDVSFIVNNTTLQQIFAKLFIFVDDNGEVVQIPEEPNGNGAAL 1151


>AY121677-1|AAM52004.1|  507|Drosophila melanogaster RE27528p
           protein.
          Length = 507

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 102 PGARAPYLSEMKFFNETSYEPIPIYPVMDNNGQIIDLNEEPNLDK 236
           PG    +L  MK FN  + +    Y VMD   +I++++ E  LDK
Sbjct: 187 PGRLVDHLENMKGFNLKAIK----YLVMDEADRILNMDFEVELDK 227


>AY052148-1|AAK93572.1|  373|Drosophila melanogaster SD10847p
           protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 138 ISFHSSTVLLRQEIQAILPPPLCAVSGLVRVDKSLAARIK 19
           +S  S+ +LLR+    +   P CAV  L R++  +A+R K
Sbjct: 3   MSIDSNKLLLRKGDMKLDNYPTCAVEALTRLETLIASRNK 42


>AE014296-3359|AAN12130.1|  373|Drosophila melanogaster CG5274-PB,
           isoform B protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 138 ISFHSSTVLLRQEIQAILPPPLCAVSGLVRVDKSLAARIK 19
           +S  S+ +LLR+    +   P CAV  L R++  +A+R K
Sbjct: 3   MSIDSNKLLLRKGDMKLDNYPTCAVEALTRLETLIASRNK 42


>AE014296-3358|AAF51594.1|  373|Drosophila melanogaster CG5274-PA,
           isoform A protein.
          Length = 373

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 138 ISFHSSTVLLRQEIQAILPPPLCAVSGLVRVDKSLAARIK 19
           +S  S+ +LLR+    +   P CAV  L R++  +A+R K
Sbjct: 3   MSIDSNKLLLRKGDMKLDNYPTCAVEALTRLETLIASRNK 42


>AE014134-3342|AAF53963.1|  507|Drosophila melanogaster CG9253-PA
           protein.
          Length = 507

 Score = 26.6 bits (56), Expect = 8.7
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 102 PGARAPYLSEMKFFNETSYEPIPIYPVMDNNGQIIDLNEEPNLDK 236
           PG    +L  MK FN  + +    Y VMD   +I++++ E  LDK
Sbjct: 187 PGRLVDHLENMKGFNLKAIK----YLVMDEADRILNMDFEVELDK 227


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,847,679
Number of Sequences: 53049
Number of extensions: 287615
Number of successful extensions: 526
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 819378027
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)