Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0414
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   1.7  
UniRef50_UPI000069DB5B Cluster: UPI000069DB5B related cluster; n...    33   5.3  
UniRef50_Q8IER9 Cluster: Putative uncharacterized protein MAL13P...    33   7.0  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = -1

Query: 620 AGWCYLPVRTHKRSYHQ 570
           A W YLP RTHKRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_UPI000069DB5B Cluster: UPI000069DB5B related cluster; n=1;
           Xenopus tropicalis|Rep: UPI000069DB5B UniRef100 entry -
           Xenopus tropicalis
          Length = 372

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +1

Query: 214 HTIIHNYFHTYIHIHN*KH 270
           HT IH Y HTYIH H   H
Sbjct: 12  HTYIHTYIHTYIHTHTHTH 30


>UniRef50_Q8IER9 Cluster: Putative uncharacterized protein
           MAL13P1.25; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL13P1.25 - Plasmodium
           falciparum (isolate 3D7)
          Length = 1290

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -2

Query: 298 SLVCRSSAVCASNYVYVCMYENNYVL*CDIIFSEFVIFIFYFN 170
           S++C ++    S Y  +C   NNY++  D I  E  +F+ +FN
Sbjct: 260 SILCITTNKDISKYQKICSIPNNYIINYDNIIQEIQMFVNHFN 302


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,923,613
Number of Sequences: 1657284
Number of extensions: 11427071
Number of successful extensions: 26488
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26090
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)