Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0414
         (716 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540...    28   6.4  

>10_08_0583 -
           18952168-18952263,18953663-18953740,18954006-18954081,
           18954687-18954735,18955271-18955469,18955761-18955799,
           18955800-18956123
          Length = 286

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 549 HCEYY-FLLVVGPLVSPHG*VTPPCLFLP*SSNAFRFEGWGRPLFVTI 689
           HC Y   +LVV  L S H      C+ L   S AF    W R L V++
Sbjct: 64  HCHYCDTVLVVSDLRSNHAHFLSICVHLALDSRAFLVHPWRRVLQVSV 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,350,531
Number of Sequences: 37544
Number of extensions: 265387
Number of successful extensions: 486
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 486
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1862792824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)