Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0410
         (686 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0463 - 4075037-4075316,4075997-4076151,4076818-4078861,408...    28   6.0  
10_08_0252 - 16191136-16191279,16191639-16191750,16191833-161919...    28   8.0  
01_06_1449 - 37444769-37446190                                         28   8.0  

>08_01_0463 -
           4075037-4075316,4075997-4076151,4076818-4078861,
           4080757-4081589
          Length = 1103

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +1

Query: 445 DGIIVNSSSEHCPRIIRYAIHWSRNSY 525
           DGI V S S H  R++    H+SRN Y
Sbjct: 581 DGITVESPSFHVLRVLALENHFSRNYY 607


>10_08_0252 -
           16191136-16191279,16191639-16191750,16191833-16191924,
           16192564-16192641,16192764-16192796,16193712-16193771,
           16193912-16193999,16194155-16194180
          Length = 210

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 410 CSSCFKEQNVQSYQSSC 360
           CS C KEQ+VQ Y S C
Sbjct: 61  CSLCDKEQDVQQYCSGC 77


>01_06_1449 - 37444769-37446190
          Length = 473

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 2/23 (8%)
 Frame = -3

Query: 483 WAVFRGAIYDNPVIPI--FPAPP 421
           W    G +Y  PVIPI  FP PP
Sbjct: 239 WLELLGELYQKPVIPIGMFPPPP 261


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,559,897
Number of Sequences: 37544
Number of extensions: 423165
Number of successful extensions: 943
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)