Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0410
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    28   0.24 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    27   0.42 
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   3.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   3.9  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   5.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.0  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 259  TRRETSDLCM*LNNDNHVLMVVPSRNLTYICYE 161
            T RE+ D+C+   ND+  + VVPS N T   +E
Sbjct: 1259 TARESVDICVTDFNDHAPVFVVPSGNTTVKVFE 1291


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 124 RVLSGRQRLGSAPGIAEVHGRR*P 53
           R  +GR R G  PG AE H RR P
Sbjct: 315 REAAGRLRTGPVPGAAERHRRRRP 338


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = -2

Query: 226 LNNDNHVLMVVPSRNLTYICYERYDMSFFKRGLWRVLSGRQRLGSAPGIAEV 71
           L  D HV  VV SRN  + C +R    F   G         ++G+    +EV
Sbjct: 224 LEEDQHVFHVVKSRNFDH-CEQRMGFHFGFSGFSDFKPNTNQMGNIMTKSEV 274


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = -2

Query: 226 LNNDNHVLMVVPSRNLTYICYERYDMSFFKRGLWRVLSGRQRLGSAPGIAEV 71
           L  D HV  VV SRN  + C +R    F   G         ++G+    +EV
Sbjct: 224 LEEDQHVFHVVKSRNFDH-CEQRMGFHFGFSGFSDFKPNTNQMGNIMTKSEV 274


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 38  PPDSEWLPSPMDFSNARG 91
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 312 VHQHFRRSQRSLWR*STG*LIRLYIL 389
           VH+  R+ QR LWR  +   I+ Y L
Sbjct: 802 VHEEDRKFQRILWRSHSSEKIKTYEL 827


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 759,897
Number of Sequences: 2352
Number of extensions: 15945
Number of successful extensions: 30
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)