Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0409
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    25   0.60 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    25   0.60 
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   3.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -3

Query: 585 YFPIEVINMMSDQTACAKRSTGEFEVR*ISTFTVK*FRFL*TFIY*FRT 439
           Y  +E+  +  D    A      FEV+ ++ F V  + F+ TF Y F T
Sbjct: 204 YHLVEISEIHFDLCQAADDLNRYFEVQVLTIFGVSFYFFISTFFYFFTT 252



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 642 YFHISRFFFFY 674
           YF IS FF+F+
Sbjct: 240 YFFISTFFYFF 250


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -3

Query: 585 YFPIEVINMMSDQTACAKRSTGEFEVR*ISTFTVK*FRFL*TFIY*FRT 439
           Y  +E+  +  D    A      FEV+ ++ F V  + F+ TF Y F T
Sbjct: 200 YHLVEISEIHFDLCQAADDLNRYFEVQVLTIFGVSFYFFISTFFYFFTT 248



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 642 YFHISRFFFFY 674
           YF IS FF+F+
Sbjct: 236 YFFISTFFYFF 246


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 517 FAGGPFRAGGLVAHHVYDFY 576
           ++G   +AG +V  H+YD +
Sbjct: 75  YSGHKLKAGSMVHLHIYDMH 94


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 33  LCSSETMSASNR-KRIFQIGPVLSEPIRNKQTNKSFLFIIL 152
           LC    +    R K    + PV+SEPI +K+     + + L
Sbjct: 206 LCFQVFLEGERRGKFTVPLTPVVSEPIYDKKAMSDLMIVKL 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,946
Number of Sequences: 336
Number of extensions: 3348
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)