Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0407
         (585 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4T7S8 Cluster: Chromosome undetermined SCAF8002, whole...    39   0.100
UniRef50_Q630X8 Cluster: Hypothetical and glycosyltransferase fu...    33   6.6  
UniRef50_Q7R919 Cluster: Putative uncharacterized protein PY0705...    33   6.6  
UniRef50_A0CV28 Cluster: Chromosome undetermined scaffold_29, wh...    33   6.6  
UniRef50_UPI0000D55BC9 Cluster: PREDICTED: similar to CG8603-PA,...    32   8.7  
UniRef50_Q8IL36 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  
UniRef50_Q54P65 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  
UniRef50_Q23WM7 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  

>UniRef50_Q4T7S8 Cluster: Chromosome undetermined SCAF8002, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF8002,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 105

 Score = 38.7 bits (86), Expect = 0.100
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = +3

Query: 132 KHTHTSLLFSLVKIYKRN*LNLIDTLFHYKELNVHVNCAHCMRIFTIHT--QHNHENLLI 305
           +H H SL F+L+ ++    L L  +L H   L VHV C   + +   H     +    L+
Sbjct: 25  QHLHCSLHFTLIHLHSTTLLLLYPSLLHPSSLPVHVPCCMLLHVVLTHAVLSRSPGETLL 84

Query: 306 YLNFPFHSYYLFK 344
              +  H  Y+F+
Sbjct: 85  RFQYVSHQLYMFE 97


>UniRef50_Q630X8 Cluster: Hypothetical and glycosyltransferase fusion
            protein; n=1; Bacillus cereus E33L|Rep: Hypothetical and
            glycosyltransferase fusion protein - Bacillus cereus
            (strain ZK / E33L)
          Length = 1176

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +3

Query: 174  YKRN*LN-LIDTLFHYKELNVHVNCAHCMRIFTIHTQHNHENLLIYLNFPFHSY 332
            YK   LN L+DT   Y E+    N A+ ++ F     HN++N+L +++ P+ +Y
Sbjct: 998  YKNKELNVLVDTFTGYLEIFGKYNSAN-VKTFVRSYMHNYQNILEWIDTPYIAY 1050


>UniRef50_Q7R919 Cluster: Putative uncharacterized protein PY07051;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY07051 - Plasmodium yoelii
           yoelii
          Length = 257

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
 Frame = +3

Query: 162 LVKIYKRN*LNLIDTLFHYKELNVHVNCAHCMR--IFTIHTQHNHENLLIYLNFPFHSYY 335
           L  I  +N +NL   LFHY   N+ +N  +C++  +F I+      N+L YL    ++YY
Sbjct: 36  LTTINMKNIINLEQFLFHYSYKNMIINTFNCLKDLLFYINNTVLIYNIL-YLFLVINNYY 94

Query: 336 -LFKIRAIMERNR 371
             F I      NR
Sbjct: 95  NKFDINTCSVANR 107


>UniRef50_A0CV28 Cluster: Chromosome undetermined scaffold_29, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_29,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1518

 Score = 32.7 bits (71), Expect = 6.6
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -1

Query: 282 VEYVL*IFSYNEHNLRVR*VLY-NEIKYLLNLINFFYKF*PKKTEETCACVFQYYSCNYF 106
           + Y+L  F  NEHN+ V   +   E KY L+    FYK       + C  +F  +   Y+
Sbjct: 548 ISYILPDFILNEHNILVNNFIQTGEAKYYLSYSQSFYKS-ANNFVKCCDLLFDIHFDEYY 606

Query: 105 LF 100
           LF
Sbjct: 607 LF 608


>UniRef50_UPI0000D55BC9 Cluster: PREDICTED: similar to CG8603-PA,
           isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG8603-PA, isoform A - Tribolium castaneum
          Length = 1408

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
 Frame = +3

Query: 246 AHCMRIFTIHTQHNHENLLIYLNFPF----HSYYLF-KIRAIMERNRSMPPMNTNLTKNF 410
           +H  + +T HT +  E ++ Y   P+    HS Y   K++ +MER   +PP       N 
Sbjct: 181 SHRSKSWTDHTNYPKEKVVAYTR-PYMKRQHSAYTQQKLKTVMERCEKIPPETYESRYNE 239

Query: 411 EIFLFHANR 437
            ++L H +R
Sbjct: 240 HLYLSHVDR 248


>UniRef50_Q8IL36 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 862

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
 Frame = +3

Query: 213 HYKELN-VHVNCAHCMRIFTIHTQHN--HENLLIYLNFPFHSYYLFKIRAIMERN----R 371
           +Y E N ++VN  +   I     +HN  +++LL  L F F  +Y+ K   +M ++     
Sbjct: 684 NYNENNMIYVNNTNDKHILN-SDEHNAGYDSLLTCLLFIFQCHYILKKNNLMWKDIYFSE 742

Query: 372 SMPPMNTNLTKNFEIFLFHANRFIIFKSITN*LLMAFRSN 491
           S    NTN    F+IFL  +N+  I K+  N + +    N
Sbjct: 743 SNKANNTNSKYFFDIFLNMSNKIKIVKTQPNVISLCSAEN 782


>UniRef50_Q54P65 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 757

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +3

Query: 189 LNLIDTLFHYKELNVHVNCAHCMR--IFTIHTQHNHENLLIYLNFPFHSYYLFKIRAIME 362
           L+ I+T  H + L V  N  H  R  +  I + HN  +L I   + FH Y L K   I +
Sbjct: 343 LDEIETTLHAQSLRVLFNAIHKQRNNLKIIMSTHNSTSLRIASEYGFHYYLLEKSLTISD 402

Query: 363 RN 368
            N
Sbjct: 403 GN 404


>UniRef50_Q23WM7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 465

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 28/87 (32%), Positives = 44/87 (50%)
 Frame = +3

Query: 192 NLIDTLFHYKELNVHVNCAHCMRIFTIHTQHNHENLLIYLNFPFHSYYLFKIRAIMERNR 371
           NL+++LF++K+LN  V  +         +  N + L + L F   S +LF+ + I+    
Sbjct: 274 NLMESLFYHKDLNQEVKLS--------LSYQNQKILNLNLFFLGISNHLFEDQQIIVSIT 325

Query: 372 SMPPMNTNLTKNFEIFLFHANRFIIFK 452
           S  P   NL KN  I LF + + I FK
Sbjct: 326 STSPPKINLIKNSHIQLF-SEQLIDFK 351


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 482,621,965
Number of Sequences: 1657284
Number of extensions: 8898958
Number of successful extensions: 18696
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18687
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)