Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0407
         (585 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0195 + 6578384-6578629,6578710-6579300,6586302-6587512,658...    27   8.3  
05_06_0174 - 26149663-26149885,26150353-26151701                       27   8.3  

>10_02_0195 +
           6578384-6578629,6578710-6579300,6586302-6587512,
           6587593-6587844,6587932-6588042,6588133-6588214,
           6588299-6588382,6588464-6588658
          Length = 923

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = +2

Query: 413 NFPFSRKSLHYF*KYYKLIINGVSKQQVNQARTQEKTTKSL 535
           NF FS K LH F K  K+ IN V    ++Q    +KT  S+
Sbjct: 656 NFAFSFKDLHAFLKMDKMDINLVGAWCLSQWVDAQKTGASI 696


>05_06_0174 - 26149663-26149885,26150353-26151701
          Length = 523

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 322 SIATIYLKSGQLWNAIDRCLQ*T 390
           S+ T++ + GQLW A  RCL  T
Sbjct: 432 SVGTLFRRDGQLWLAGGRCLMVT 454


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,645,356
Number of Sequences: 37544
Number of extensions: 196568
Number of successful extensions: 301
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)