Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0407
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.     25   1.8  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    24   4.2  
EF588645-1|ABQ96833.1|  161|Anopheles gambiae transposase protein.     23   5.5  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.5  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   7.3  

>EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 213 HYKELNVHVNCAHCMRIFTIHTQHNHENLLIYLN 314
           H+  +   V C +C+++F  +T+  + NL   LN
Sbjct: 15  HFSPVETGVKCLYCLKVFK-YTKGTNSNLKRDLN 47


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 339 FKIRAIMERNRSMPPMNTNLTKNFEIFLFHANRFIIF 449
           F++R I  R        T+ TKN    L   +RF+ F
Sbjct: 21  FRLRTISNRTHQRHVYGTSKTKNASAPLLPVDRFVGF 57


>EF588645-1|ABQ96833.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 213 HYKELNVHVNCAHCMRIFTIHTQHNHENLLIYLN 314
           H   +   V C +C+++F  +T+  + NL   LN
Sbjct: 15  HLSPVETGVKCLYCLKVFK-YTKGTNSNLKRDLN 47


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +3

Query: 189 LNLIDTLFHYKELNVHVNCAHCMRIFTIHTQHNHENLLIYLNFP 320
           + LI+ L   K+L + +     + +F  + Q+N E L     FP
Sbjct: 177 IQLIEQLDSNKQLAIALRTESKLMLFRFNNQYNLEKLTTIDEFP 220


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +3

Query: 264 FTIHTQHNHENLLIYLNF 317
           F +H +H H+ +++YL +
Sbjct: 189 FCVHVKHPHKLIVMYLKY 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,692
Number of Sequences: 2352
Number of extensions: 9903
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)