Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0406
         (522 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6F0H2 Cluster: Putative multidrug ABC transporter perm...    33   4.0  
UniRef50_Q4X2Q3 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q0TYD7 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  

>UniRef50_Q6F0H2 Cluster: Putative multidrug ABC transporter
           permease component; n=1; Mesoplasma florum|Rep: Putative
           multidrug ABC transporter permease component -
           Mesoplasma florum (Acholeplasma florum)
          Length = 284

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
 Frame = +1

Query: 259 NIFKLKLNVVFVAYLPYRK---VYIFARIKCNKYEKYQRKGTSNSFTGGKTSFESAWE 423
           ++FK +  V+F  ++P++    +Y+++  K    E YQ  GT  +F G   SF S+W+
Sbjct: 203 SLFKSQGMVIFTYFIPHKYPVFLYMYSFSKTGWTETYQ--GTQVTFQGAVNSFTSSWQ 258


>UniRef50_Q4X2Q3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 63

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +1

Query: 208 IILESVYLLISSIHKRMNIFKLKLNVVFVAYLPYRKVYIFARIKCNKY 351
           II  S Y      HK  NI ++K N++F+ +  Y+K+  F+    NKY
Sbjct: 8   IIAASNYYTPYITHKT-NISRIKTNILFLFFYSYKKILFFSCAHINKY 54


>UniRef50_Q0TYD7 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 631

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 244 IHKRMNIFKLKLNVVFVAYLPYRKVYIFARIKCNKYEKY 360
           IH  +N+  LK N+ F  +LP+ + Y    I  N  E+Y
Sbjct: 535 IHNNLNLHSLKANITFDFHLPFPESYDGISILVNDVERY 573


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,943,133
Number of Sequences: 1657284
Number of extensions: 8364688
Number of successful extensions: 15522
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15520
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)