Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0406
         (522 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0187 - 15063791-15063967,15064554-15064726,15065371-150654...    28   5.2  
01_06_1242 + 35679861-35679910,35680098-35680521                       28   5.2  

>12_02_0187 -
           15063791-15063967,15064554-15064726,15065371-15065497,
           15065794-15065817
          Length = 166

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 19/60 (31%), Positives = 25/60 (41%)
 Frame = +1

Query: 343 NKYEKYQRKGTSNSFTGGKTSFESAWEITTALYIFERRSCCTATTETLRTLVSRWGRPFT 522
           + Y+K + KG S++ T         +  T   Y F RR C  A  E     VSRW    T
Sbjct: 9   DSYDKGRTKGGSSTRTDDTCGMSHTF--TECAYSFLRR-CVLAAEEKCAIFVSRWNTEHT 65


>01_06_1242 + 35679861-35679910,35680098-35680521
          Length = 157

 Score = 27.9 bits (59), Expect = 5.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 343 NKYEKYQRKGTSNSFTGGKTSFESAWEITTALYIFERRS 459
           +KY K  +KG  + F   ++ F  A E+T   Y   RRS
Sbjct: 39  SKYGKQIKKGVVSFFAVDESRFTQADEVTCVPYFHSRRS 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,995,108
Number of Sequences: 37544
Number of extensions: 211643
Number of successful extensions: 349
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 346
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)