Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0406
         (522 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding pr...    24   2.7  
AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative odorant-b...    24   2.7  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   6.2  

>AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding
           protein AgamOBP27 protein.
          Length = 119

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 49  VRSTNRFLDKEVSGGIY 99
           +R TNRF+ KE+S  +Y
Sbjct: 69  MRFTNRFVSKEISEKVY 85


>AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative
           odorant-binding protein OBPjj12 protein.
          Length = 119

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 49  VRSTNRFLDKEVSGGIY 99
           +R TNRF+ KE+S  +Y
Sbjct: 69  MRFTNRFVSKEISEKVY 85


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 15/71 (21%), Positives = 30/71 (42%)
 Frame = +1

Query: 169  IYGRSINLEWAPKIILESVYLLISSIHKRMNIFKLKLNVVFVAYLPYRKVYIFARIKCNK 348
            ++  + +L+W  +I+     LL   I    +    ++ VV    LPY   ++ A+     
Sbjct: 803  VWTEATDLQWCRRILDRVQRLLAQGITSAFHSTSCEVAVVLAGELPY---HLLAKEDARC 859

Query: 349  YEKYQRKGTSN 381
            Y + Q    S+
Sbjct: 860  YNRQQSSPDSS 870


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,033
Number of Sequences: 2352
Number of extensions: 9733
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)